RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 OTUD1Q5VV17 481 aaPredicted RBP22.62■■□□□ 1.21
SNX1-206ENST00000559389 PLEKHA7Q6IQ23 1121 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 JOSD2Q8TAC2 188 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 WBP2Q969T9 261 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 PLD4Q96BZ4 506 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 TRMT61BQ9BVS5 477 aaKnown RBP22.62■■□□□ 1.21
SNX1-206ENST00000559389 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.62■■□□□ 1.21
SNX1-206ENST00000559389 STAP1Q9ULZ2 295 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 DUSP12Q9UNI6 340 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 E2F8A0AVK6 867 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 SIGLEC16A6NMB1 481 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 TRUB2O95900 331 aaKnown RBP22.61■■□□□ 1.21
SNX1-206ENST00000559389 KRT3P12035 628 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 RNASE9P60153 205 aaKnown RBP22.61■■□□□ 1.21
SNX1-206ENST00000559389 ARHGAP29Q52LW3 1261 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 TMEM139Q8IV31 216 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 EMC1Q8N766 993 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 TTC16Q8NEE8 873 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 ADAM32Q8TC27 787 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 ASIC4Q96FT7 647 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 NPY6RQ99463 290 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 DDX23Q9BUQ8 820 aaKnown RBP22.61■■□□□ 1.21
SNX1-206ENST00000559389 THG1LQ9NWX6 298 aaKnown RBP22.61■■□□□ 1.21
SNX1-206ENST00000559389 RRN3Q9NYV6 651 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 CNOT8Q9UFF9 292 aaKnown RBP22.61■■□□□ 1.21
SNX1-206ENST00000559389 MUTYHQ9UIF7 546 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 SH3BP1Q9Y3L3 701 aa22.61■■□□□ 1.21
SNX1-206ENST00000559389 C2CD4BA6NLJ0 364 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 CHADO15335 359 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 NARSO43776 548 aaKnown RBP22.6■■□□□ 1.21
SNX1-206ENST00000559389 SRFP11831 508 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 ABCB4P21439 1286 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 GDI1P31150 447 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 KPNA1P52294 538 aaPredicted RBP22.6■■□□□ 1.21
SNX1-206ENST00000559389 RING1Q06587 406 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 EIF4EBP2Q13542 120 aaPredicted RBP22.6■■□□□ 1.21
SNX1-206ENST00000559389 Q6ZNB5 142 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 TMTC1Q8IUR5 882 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 YAF2Q8IY57 180 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 CCDC170Q8IYT3 715 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 NT5C3BQ969T7 300 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 MCEEQ96PE7 176 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 THAP2Q9H0W7 228 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 FAM204AQ9H8W3 233 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 SLC2A4RGQ9NR83 387 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 PARVAQ9NVD7 372 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 TLR6Q9Y2C9 796 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 WNT6Q9Y6F9 365 aa22.6■■□□□ 1.21
SNX1-206ENST00000559389 SOWAHDA6NJG2 315 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 ARNTLO00327 626 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 SCAMP3O14828 347 aaKnown RBP22.59■■□□□ 1.21
SNX1-206ENST00000559389 ZNF263O14978 683 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 HMBSP08397 361 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 SULT1E1P49888 294 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 GALCP54803 685 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 TBX4P57082 545 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 MAMLD1Q13495 774 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 SLC25A52Q3SY17 297 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 CC2D1AQ6P1N0 951 aaPredicted RBP22.59■■□□□ 1.21
SNX1-206ENST00000559389 HTR3DQ70Z44 454 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 OSCP1Q8WVF1 389 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 SLC39A13Q96H72 371 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 ZFYVE19Q96K21 471 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 FCRL2Q96LA5 508 aaPredicted RBP22.59■■□□□ 1.21
SNX1-206ENST00000559389 BAG1Q99933 345 aaPredicted RBP22.59■■□□□ 1.21
SNX1-206ENST00000559389 FAM83CQ9BQN1 747 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 ADAM33Q9BZ11 813 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 DDIT4Q9NX09 232 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 LSM7Q9UK45 103 aaKnown RBP22.59■■□□□ 1.21
SNX1-206ENST00000559389 SCINQ9Y6U3 715 aa22.59■■□□□ 1.21
SNX1-206ENST00000559389 ANKRD62A6NC57 917 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 LCA5LO95447 670 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 KLKB1P03952 638 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 TFE3P19532 575 aaPredicted RBP22.58■■□□□ 1.21
SNX1-206ENST00000559389 CORO1AP31146 461 aaKnown RBP22.58■■□□□ 1.21
SNX1-206ENST00000559389 RFC1P35251 1148 aaPredicted RBP22.58■■□□□ 1.21
SNX1-206ENST00000559389 CYLC1P35663 651 aaPredicted RBP22.58■■□□□ 1.21
SNX1-206ENST00000559389 RPL7AP62424 266 aaKnown RBP22.58■■□□□ 1.21
SNX1-206ENST00000559389 GPC5P78333 572 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 PDGFRLQ15198 375 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 BNIPLQ7Z465 357 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 RXFP2Q8WXD0 754 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 DNASE1L2Q92874 299 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 PGAP3Q96FM1 320 aaPredicted RBP22.58■■□□□ 1.21
SNX1-206ENST00000559389 CFAP57Q96MR6 1250 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 TBCBQ99426 244 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 PACSIN1Q9BY11 444 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 BRD9Q9H8M2 597 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 CALCOCO1Q9P1Z2 691 aa22.58■■□□□ 1.21
SNX1-206ENST00000559389 TICRRQ7Z2Z1 1910 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 UNC80Q8N2C7 3258 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 M0QYT0 321 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 SLC9A3R1O14745 358 aaPredicted RBP22.57■■□□□ 1.2
SNX1-206ENST00000559389 CYP1A2P05177 515 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 GPD1P21695 349 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 SDC4P31431 198 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 PTPN9P43378 593 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 IFNAR2P48551 515 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 NUGGCQ68CJ6 796 aa22.57■■□□□ 1.2
SNX1-206ENST00000559389 BBS7Q8IWZ6 715 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms