RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 M0QYT0 321 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 SMAPO00193 183 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 CAPN9O14815 690 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 NCAM2O15394 837 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 TEX28O15482 410 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 ADAM12O43184 909 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 LATS1O95835 1130 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 OLFM2O95897 454 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 KRT1P04264 644 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 ADH1AP07327 375 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 OR4Q2P0C623 313 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 NCAM1P13591 858 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 CCR1P32246 355 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 PBX3P40426 434 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 RNASE9P60153 205 aaKnown RBP11.31□□□□□ -0.6
PABPN1-203ENST00000553960 DEUP1Q05D60 604 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
PABPN1-203ENST00000553960 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
PABPN1-203ENST00000553960 PTPROQ16827 1216 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 C5orf22Q49AR2 442 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 ATP13A4Q4VNC1 1196 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 SH3PXD2AQ5TCZ1 1133 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 C8orf74Q6P047 294 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 SND1Q7KZF4 910 aaKnown RBP eCLIP11.31□□□□□ -0.6
PABPN1-203ENST00000553960 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 KLHL23Q8NBE8 558 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 LEMD2Q8NC56 503 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 PSMG2Q969U7 264 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 ERP44Q9BS26 406 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 LRRC1Q9BTT6 524 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 EMILIN2Q9BXX0 1053 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 PARD6BQ9BYG5 372 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 FOXP3Q9BZS1 431 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 RAB17Q9H0T7 212 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 PIGVQ9NUD9 493 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 DPP7Q9UHL4 492 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 NAALADL1Q9UQQ1 740 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 MYO16Q9Y6X6 1858 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 CEP290O15078 2479 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 IGLV3-10A0A075B6K4 115 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ZBBXA8MT70 800 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 HACD1B0YJ81 288 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 H3BNC9 293 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 LIASO43766 372 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 GRAP2O75791 330 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 SEC24AO95486 1093 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 FGF19O95750 216 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 CNPP09543 421 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 HNRNPA1P09651 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 TFE3P19532 575 aaPredicted RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ALDH1A3P47895 512 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 SULT1E1P49888 294 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 VCPP55072 806 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 MLLT6P55198 1093 aaPredicted RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 CDH6P55285 790 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ATP11AP98196 1134 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 DPYSQ14117 519 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 PAFAH1B3Q15102 231 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 NOMO1Q15155 1222 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ELF2Q15723 593 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 DDR2Q16832 855 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ANKRD20A8PQ5CZ79 823 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 EFHC2Q5JST6 749 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 TEX35Q5T0J7 233 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 SPOUT1Q5T280 376 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ANKS1BQ7Z6G8 1248 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 LZTR1Q8N653 840 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 PQLC3Q8N755 202 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 PLD5Q8N7P1 536 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 B3GALT6Q96L58 329 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 KLHL5Q96PQ7 755 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 HERPUD2Q9BSE4 406 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ZWILCHQ9H900 591 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 NMUR1Q9HB89 426 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 FAM114A2Q9NRY5 505 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 ARGLU1Q9NWB6 273 aaPredicted RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 PPARGC1AQ9UBK2 798 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
PABPN1-203ENST00000553960 RASAL2Q9UJF2 1139 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 STOML2Q9UJZ1 356 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
PABPN1-203ENST00000553960 YIPF1Q9Y548 306 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms