RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 TMEM25Q86YD3 366 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 FMNL3Q8IVF7 1028 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 CPXM2Q8N436 756 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 WDTC1Q8N5D0 677 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 ZBTB44Q8NCP5 570 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 GOLGA1Q92805 767 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 ERGIC2Q96RQ1 377 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 MIS12Q9H081 205 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 PCDHGA2Q9Y5H1 932 aa18.13■□□□□ 0.49
USP35-202ENST00000528910 MYO18AQ92614 2054 aaKnown RBP18.13■□□□□ 0.49
USP35-202ENST00000528910 A0A0A0MRY4 1105 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 SYCE3A1L190 88 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 K7ESF4 209 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 LILRB5O75023 590 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 SLC6A11P48066 632 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 ZNF165P49910 485 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 MESP2Q0VG99 397 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 NNTQ13423 1086 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 SYCP1Q15431 976 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 TSSK4Q6SA08 328 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 PASD1Q8IV76 773 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 SCUBE3Q8IX30 993 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 C1orf131Q8NDD1 294 aaKnown RBP18.12■□□□□ 0.49
USP35-202ENST00000528910 CCDC26Q8TAB7 109 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 EPS8L1Q8TE68 723 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 CPXM1Q96SM3 734 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 PNKPQ96T60 521 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 TRIM62Q9BVG3 475 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 FAM207AQ9NSI2 230 aaPredicted RBP18.12■□□□□ 0.49
USP35-202ENST00000528910 C2orf42Q9NWW7 574 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 ZSCAN32Q9NX65 697 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 SFMBT1Q9UHJ3 866 aa18.12■□□□□ 0.49
USP35-202ENST00000528910 AGO1Q9UL18 857 aaKnown RBP18.12■□□□□ 0.49
USP35-202ENST00000528910 SMTNL1A8MU46 457 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 K7EQS6 105 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 MSI1O43347 362 aaKnown RBP18.11■□□□□ 0.49
USP35-202ENST00000528910 ATG13O75143 517 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 TULP3O75386 442 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 LATS1O95835 1130 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 APODP05090 189 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 HMBSP08397 361 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 CDK11BP21127 795 aaKnown RBP18.11■□□□□ 0.49
USP35-202ENST00000528910 HOXA6P31267 233 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 MRE11P49959 708 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 RING1Q06587 406 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 IQCB1Q15051 598 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 ANO4Q32M45 955 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 DDX1Q92499 740 aaKnown RBP18.11■□□□□ 0.49
USP35-202ENST00000528910 ACDQ96AP0 544 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 PIWIL1Q96J94 861 aaKnown RBP18.11■□□□□ 0.49
USP35-202ENST00000528910 NOX5Q96PH1 765 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 BBS2Q9BXC9 721 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 SEMA4AQ9H3S1 761 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 ARHGEF4Q9NR80 690 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 ASNSD1Q9NWL6 643 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 WDR35Q9P2L0 1181 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 TJP2Q9UDY2 1190 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 STOML2Q9UJZ1 356 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 CEP83Q9Y592 693 aa18.11■□□□□ 0.49
USP35-202ENST00000528910 NEDD8-MDP1E9PL57 170 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 KAT7O95251 611 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 PENKP01210 267 aaPredicted RBP18.1■□□□□ 0.49
USP35-202ENST00000528910 TYRP14679 529 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 KRT9P35527 623 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 CHKAP35790 457 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 GRIA2P42262 883 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 POLR2FP61218 127 aaKnown RBP18.1■□□□□ 0.49
USP35-202ENST00000528910 UBXN1Q04323 297 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 KDSRQ06136 332 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 PTPN20Q4JDL3 420 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 NOP9Q86U38 636 aaKnown RBP18.1■□□□□ 0.49
USP35-202ENST00000528910 DENND1CQ8IV53 801 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 TERB1Q8NA31 727 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 RPLP0P6Q8NHW5 317 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 DQX1Q8TE96 717 aaKnown RBP18.1■□□□□ 0.49
USP35-202ENST00000528910 USP33Q8TEY7 942 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 FAM149B1Q96BN6 582 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 P2RY11Q96G91 374 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 PPP1R13BQ96KQ4 1090 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 DEC1Q9P2X7 70 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 NOCTQ9UK39 431 aaKnown RBP18.1■□□□□ 0.49
USP35-202ENST00000528910 R4GN57 208 aa18.1■□□□□ 0.49
USP35-202ENST00000528910 PRR23AA6NEV1 266 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 GFRA2O00451 464 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 LSM8O95777 96 aaKnown RBP18.09■□□□□ 0.49
USP35-202ENST00000528910 IGLV3-25P01717 112 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 GLI1P08151 1106 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 NCAM1P13591 858 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 SOX5P35711 763 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 HARS2P49590 506 aaKnown RBP18.09■□□□□ 0.49
USP35-202ENST00000528910 NRLP54845 237 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 ZNF445P59923 1031 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 PREPLQ4J6C6 727 aaPredicted RBP18.09■□□□□ 0.49
USP35-202ENST00000528910 FYB2Q5VWT5 728 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 NUGGCQ68CJ6 796 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 OLFML1Q6UWY5 402 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 TPGS1Q6ZTW0 290 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 SYT13Q7L8C5 426 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 SFTPA1Q8IWL2 248 aa18.09■□□□□ 0.49
USP35-202ENST00000528910 TMEM35BQ8NCS4 154 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms