RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 CDH8P55286 799 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 VAC14Q08AM6 782 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 TMEM119Q4V9L6 283 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 DHX40Q8IX18 779 aaKnown RBP18.49■□□□□ 0.55
PVT1-220ENST00000524165 NAF1Q96HR8 494 aaKnown RBP18.49■□□□□ 0.55
PVT1-220ENST00000524165 CDK5RAP3Q96JB5 506 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 C8orf76Q96K31 380 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 NACA2Q9H009 215 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 PTPRJQ12913 1337 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 BOD1L1Q8NFC6 3051 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 ZDHHC11BP0C7U3 371 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 ABCB4P21439 1286 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 TOB1P50616 345 aaPredicted RBP18.48■□□□□ 0.55
PVT1-220ENST00000524165 C21orf59P57076 290 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 IRX6P78412 446 aaPredicted RBP18.48■□□□□ 0.55
PVT1-220ENST00000524165 GNL2Q13823 731 aaKnown RBP18.48■□□□□ 0.55
PVT1-220ENST00000524165 GPBP1Q86WP2 473 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 SAP25Q8TEE9 199 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 FAM213AQ9BRX8 229 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 ACE2Q9BYF1 805 aaPredicted RBP18.48■□□□□ 0.55
PVT1-220ENST00000524165 IL37Q9NZH6 218 aa18.48■□□□□ 0.55
PVT1-220ENST00000524165 LSM7Q9UK45 103 aaKnown RBP18.48■□□□□ 0.55
PVT1-220ENST00000524165 R3HCC1Q9Y3T6 440 aaKnown RBP18.48■□□□□ 0.55
PVT1-220ENST00000524165 SPTAN1Q13813 2472 aaKnown RBP18.48■□□□□ 0.55
PVT1-220ENST00000524165 YKT6O15498 198 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 SEMA4FO95754 770 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 CACUL1Q86Y37 369 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 LSMEM2Q8N112 164 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 EID2Q8N6I1 236 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 HPDLQ96IR7 371 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 ORAI3Q9BRQ5 295 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 KLF16Q9BXK1 252 aaPredicted RBP18.47■□□□□ 0.55
PVT1-220ENST00000524165 DPH1Q9BZG8 443 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 ZNF518BQ9C0D4 1074 aa18.47■□□□□ 0.55
PVT1-220ENST00000524165 RBAKQ9NYW8 714 aaPredicted RBP18.47■□□□□ 0.55
PVT1-220ENST00000524165 HEMK1Q9Y5R4 338 aaPredicted RBP18.47■□□□□ 0.55
PVT1-220ENST00000524165 FAM92AA1XBS5 289 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 TULP1O00294 542 aaPredicted RBP18.46■□□□□ 0.55
PVT1-220ENST00000524165 LDHAP00338 332 aaKnown RBP18.46■□□□□ 0.55
PVT1-220ENST00000524165 TMEM191BP0C7N4 346 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 BCAT1P54687 386 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 MFAP3P55082 362 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 RACK1P63244 317 aaKnown RBP18.46■□□□□ 0.55
PVT1-220ENST00000524165 GOLGA8FQ08AF8 430 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 GOLGA8DPQ0D2H9 430 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 ZNF234Q14588 700 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 SHBQ15464 509 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 FBXO18Q8NFZ0 1043 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 KCNE4Q8WWG9 221 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 SKA1Q96BD8 255 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 HVCN1Q96D96 273 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 FAM117AQ9C073 453 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 MTMR12Q9C0I1 747 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 BTBD1Q9H0C5 482 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 LHX5Q9H2C1 402 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 IKZF4Q9H2S9 585 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 COMMD8Q9NX08 183 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 ADAMTS1Q9UHI8 967 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 SSUH2Q9Y2M2 353 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 LRRK2Q5S007 2527 aa18.46■□□□□ 0.55
PVT1-220ENST00000524165 TERTO14746 1132 aaKnown RBP18.45■□□□□ 0.54
PVT1-220ENST00000524165 TLR5O60602 858 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 DXOO77932 396 aaKnown RBP18.45■□□□□ 0.54
PVT1-220ENST00000524165 FSBPO95073 299 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 CKMT2P17540 419 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 PTPN1P18031 435 aaKnown RBP18.45■□□□□ 0.54
PVT1-220ENST00000524165 PRKCHP24723 683 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 GNL1P36915 607 aaPredicted RBP18.45■□□□□ 0.54
PVT1-220ENST00000524165 ERVPABLB-1P60509 514 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 INSM1Q01101 510 aaPredicted RBP18.45■□□□□ 0.54
PVT1-220ENST00000524165 EIF4HQ15056 248 aaKnown RBP18.45■□□□□ 0.54
PVT1-220ENST00000524165 GEN1Q17RS7 908 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 CENPQQ7L2Z9 268 aaPredicted RBP18.45■□□□□ 0.54
PVT1-220ENST00000524165 OR2T3Q8NH03 318 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 SCAMP5Q8TAC9 235 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 FAM84AQ96KN4 292 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 TRIM4Q9C037 500 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 ZHX3Q9H4I2 956 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 PLK2Q9NYY3 685 aa18.45■□□□□ 0.54
PVT1-220ENST00000524165 KLK10O43240 276 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 TBCAO75347 108 aaKnown RBP18.44■□□□□ 0.54
PVT1-220ENST00000524165 EPHX1P07099 455 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 FAM163BP0C2L3 166 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 GRIN1Q05586 938 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 CAMK2GQ13555 558 aaPredicted RBP18.44■□□□□ 0.54
PVT1-220ENST00000524165 ZNF574Q6ZN55 896 aaPredicted RBP18.44■□□□□ 0.54
PVT1-220ENST00000524165 BHMTQ93088 406 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 SAAL1Q96ER3 474 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 ANKRD36BP1Q96IX9 119 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 MMS19Q96T76 1030 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 SNX25Q9H3E2 840 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.44■□□□□ 0.54
PVT1-220ENST00000524165 ELOVL2Q9NXB9 296 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 ANKMY1Q9P2S6 941 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 NME7Q9Y5B8 376 aa18.44■□□□□ 0.54
PVT1-220ENST00000524165 TEP1Q99973 2627 aaKnown RBP18.44■□□□□ 0.54
PVT1-220ENST00000524165 CLDN5O00501 218 aa18.43■□□□□ 0.54
PVT1-220ENST00000524165 SLC26A4O43511 780 aa18.43■□□□□ 0.54
PVT1-220ENST00000524165 TACC1O75410 805 aa18.43■□□□□ 0.54
PVT1-220ENST00000524165 PENKP01210 267 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms