RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SPTAN1Q13813 2472 aaKnown RBP5.34□□□□□ -1.56
HMGB1P23-201ENST00000518743 SPTA1P02549 2419 aa5.34□□□□□ -1.56
HMGB1P23-201ENST00000518743 FRYQ5TBA9 3013 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 XDHP47989 1333 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 PLXNB2O15031 1838 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 PHIPQ8WWQ0 1821 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 OTOGLQ3ZCN5 2332 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 LGALS16A8MUM7 142 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 J3KRW8 73 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 KIAA0391O15091 583 aaKnown RBP5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ADAMTS4O75173 837 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 POMCP01189 267 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 GRPP07492 148 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ITGA2BP08514 1039 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ITGA5P08648 1049 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 CSF2RAP15509 400 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 XBP1P17861 261 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 FPR1P21462 350 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 PAPOLAP51003 745 aaKnown RBP5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ITGA8P53708 1063 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 GP2P55259 537 aaKnown RBP5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 CLRN1P58418 232 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 CTBP1Q13363 440 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 NFYCQ13952 458 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC29A2Q14542 456 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 CCL14Q16627 93 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM110CQ1W6H9 321 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 MTHFSDQ2M296 383 aaKnown RBP5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 FBXO47Q5MNV8 452 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM26FQ5R3K3 315 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 MFSD14CQ5VZR4 134 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 BORAQ6PGQ7 559 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ADGRG2Q8IZP9 1017 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 DCBLD1Q8N8Z6 715 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ANKRD53Q8N9V6 530 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 REPS2Q8NFH8 660 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZFP28Q8NHY6 868 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 STON2Q8WXE9 905 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 SOCS4Q8WXH5 440 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 MAML1Q92585 1016 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 YTHDC1Q96MU7 727 aaKnown RBP5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 SEC62Q99442 399 aaKnown RBP5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM167BQ9BTA0 163 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 STK31Q9BXU1 1019 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 CHST8Q9H2A9 424 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM83DQ9H4H8 585 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 HERC5Q9UII4 1024 aaKnown RBP5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ADAM29Q9UKF5 820 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 MYO9AB2RTY4 2548 aa5.33□□□□□ -1.56
HMGB1P23-201ENST00000518743 ITPR3Q14573 2671 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 FRYLO94915 3013 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 COL4A3Q01955 1670 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 LOC102723971A0A1B0GUV8 181 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 RRN3P2A6NIE6 340 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 AQP7P3A6NL99 342 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 ARHGAP6O43182 974 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 AGR2O95994 175 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 TIMP1P01033 207 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 LMNAP02545 664 aaKnown RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 FGBP02675 491 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 HMOX1P09601 288 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 CASRP41180 1078 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 RGS2P41220 211 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 VIPR2P41587 438 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC11A2P49281 568 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZXDAP98168 799 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 GALNT1Q10472 559 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 MRPL49Q13405 166 aaKnown RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 PDE1CQ14123 709 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 POSTNQ15063 836 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAAH2Q6GMR7 532 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 MFSD5Q6N075 450 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 LARP4Q71RC2 724 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 MAATS1Q7Z4T9 603 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 RALYLQ86SE5 291 aaKnown RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM124AQ86V42 546 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC15A4Q8N697 577 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 CELF5Q8N6W0 485 aaKnown RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 SPPL3Q8TCT6 385 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 GDPD5Q8WTR4 605 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM168AQ92567 244 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 RUBCNQ92622 972 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 RSC1A1Q92681 617 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 LRRC46Q96FV0 321 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 BORCS6Q96GS4 357 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 SIGLEC10Q96LC7 697 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 TEPSINQ96N21 525 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 NOX5Q96PH1 765 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 PYM1Q9BRP8 204 aaKnown RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 NDC1Q9BTX1 674 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 CNPPD1Q9BV87 410 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 COA1Q9GZY4 146 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 EPC1Q9H2F5 836 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 NSUN3Q9H649 340 aaKnown RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 TDRD3Q9H7E2 651 aaKnown RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 XPNPEP3Q9NQH7 507 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 RGL1Q9NZL6 768 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms