RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 C1orf127Q8N9H9 656 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 MAML3Q96JK9 1138 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 SLITRK1Q96PX8 696 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 EFHD1Q9BUP0 239 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 TRIM62Q9BVG3 475 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 ULBP1Q9BZM6 244 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 MYLK2Q9H1R3 596 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 RNPEPL1Q9HAU8 725 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 C20orf96Q9NUD7 363 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 C2CD2Q9Y426 696 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 TRPV2Q9Y5S1 764 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 TOGARAM1Q9Y4F4 1720 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 SUPT3HO75486 399 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 CD52P31358 61 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 YWHAHQ04917 246 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 PDK2Q15119 407 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 PTPN20Q4JDL3 420 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 TMEM259Q4ZIN3 620 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 FAM183BPQ6ZVS7 135 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 LRRC6Q86X45 466 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 UPF1Q92900 1129 aaKnown RBP eCLIP11.67□□□□□ -0.541e-11■■■■■ 41.1
SMPD4-218ENST00000482171 NMD3Q96D46 503 aaKnown RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 ST3GAL5Q9UNP4 418 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 MYH10P35580 1976 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 A8MUI8 341 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 ENTPD5O75356 428 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 PTPN4P29074 926 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 LHX1P48742 406 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 NOVP48745 357 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 SLC6A3Q01959 620 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 KPNB1Q14974 876 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 HABP4Q5JVS0 413 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 KLC3Q6P597 504 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 ATXN2LQ8WWM7 1075 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 FBXO32Q969P5 355 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 FAM111AQ96PZ2 611 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 MTO1Q9Y2Z2 717 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 BMPR2Q13873 1038 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 NBPF20Q3BBV1 942 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 PPP1R26Q5T8A7 1209 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 PRPF39Q86UA1 669 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 PIGZQ86VD9 579 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 PLEKHO2Q8TD55 490 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 MRPL45Q9BRJ2 306 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 TRIM17Q9Y577 477 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 MARF1Q9Y4F3 1742 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 ENDOD1O94919 500 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 AUHQ13825 339 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 DNAL1Q4LDG9 190 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 GRAMD4Q6IC98 578 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 TMEM169Q96HH4 297 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 CPXM1Q96SM3 734 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 EIF2AQ9BY44 585 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 LRCH1Q9Y2L9 728 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 LAMA4Q16363 1823 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 SIGLEC16A6NMB1 481 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 USP12O75317 370 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 SNRPAP09012 282 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 KDELR1P24390 212 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 RBL1P28749 1068 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 KPNA2P52292 529 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 GEMIN4P57678 1058 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 SPDYCQ5MJ68 293 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 TFAP2DQ7Z6R9 452 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 LCA5Q86VQ0 697 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 GALNT4Q8N4A0 578 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 CENPTQ96BT3 561 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 NTPCRQ9BSD7 190 aaKnown RBP11.66□□□□□ -0.54
SMPD4-218ENST00000482171 TRPV6Q9H1D0 765 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
SMPD4-218ENST00000482171 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 GLI3P10071 1580 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 RASSF9O75901 435 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 ELK3P41970 407 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 NCALDP61601 193 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 USP10Q14694 798 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 MAPRE1Q15691 268 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 CCL14Q16627 93 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 ZC3H12AQ5D1E8 599 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 FAM182AQ5T1J6 154 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 FAM171A1Q5VUB5 890 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 KCNT2Q6UVM3 1135 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 KATNAL2Q8IYT4 538 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 SGF29Q96ES7 293 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 MINDY3Q9H8M7 445 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 PCDH9Q9HC56 1237 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 CHD4Q14839 1912 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 PTPN1P18031 435 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 DSG1Q02413 1049 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms