RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 KIAA1217Q5T5P2 1943 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 RECQL4O94761 1208 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 CALB1P05937 261 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 CA4P22748 312 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 DHX34Q14147 1143 aaKnown RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 CYTH1Q15438 398 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 EML3Q32P44 896 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 WDR49Q8IV35 697 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 SLC39A3Q9BRY0 314 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 PABPC3Q9H361 631 aaKnown RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 MKS1Q9NXB0 559 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 H0YGN5 161 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 KCNN4O15554 427 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 POMCP01189 267 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 CYP1A2P05177 515 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 CETPP11597 493 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 ENDOUP21128 410 aaKnown RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 PPIL2Q13356 520 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 DGKDQ16760 1214 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 DUPD1Q68J44 220 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 KCTD17Q8N5Z5 321 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 NPLOC4Q8TAT6 608 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 NCSTNQ92542 709 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 GATA6Q92908 595 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 STMN2Q93045 179 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 DCLK3Q9C098 648 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 ELOVL4Q9GZR5 314 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 MROH8Q9H579 483 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 TMPRSS4Q9NRS4 437 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 NFS1Q9Y697 457 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 MCF2LO15068 1137 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 UNGP13051 313 aaPredicted RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 MIPP30301 263 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 GALNTL6Q49A17 601 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 DCAF6Q58WW2 860 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 CMPK2Q5EBM0 449 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 C12orf56Q8IXR9 622 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 GRK7Q8WTQ7 553 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 USP6NLQ92738 828 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 FAF2Q96CS3 445 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 TRIM56Q9BRZ2 755 aaKnown RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 TINF2Q9BSI4 451 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 GCOM2Q9BZD3 368 aaPredicted RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 SLC13A1Q9BZW2 595 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 DENND2DQ9H6A0 471 aaPredicted RBP12.76□□□□□ -0.37
USP11-206ENST00000469080 RXFP1Q9HBX9 757 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 PRM3Q9NNZ6 103 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 RAB6BQ9NRW1 208 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
USP11-206ENST00000469080 TMEM120BA0PK00 339 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 IQCA1LA6NCM1 817 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 FAM187AA6NFU0 413 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 DNAJC6O75061 913 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 CNMDO75829 334 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 MOCS2O96007 188 aaPredicted RBP12.75□□□□□ -0.37
USP11-206ENST00000469080 COL6A2P12110 1019 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 CRADDP78560 199 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 PPP1R26Q5T8A7 1209 aaPredicted RBP12.75□□□□□ -0.37
USP11-206ENST00000469080 C11orf63Q6NUN7 778 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 RFX8Q6ZV50 586 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 ASRGL1Q7L266 308 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 PLEKHH3Q7Z736 793 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 TLK2Q86UE8 772 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 MAELQ96JY0 434 aaKnown RBP12.75□□□□□ -0.37
USP11-206ENST00000469080 SELENONQ9NZV5 590 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 FNDC3AQ9Y2H6 1198 aaKnown RBP12.75□□□□□ -0.37
USP11-206ENST00000469080 CNTNAP2Q9UHC6 1331 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 CCDC195A0A1B0GUA6 201 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 UNC5CO95185 931 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 ERBB2P04626 1255 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 HOXC6P09630 235 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 RASSF2P50749 326 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 NEK3P51956 506 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 NAA20P61599 178 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 FOXR2Q6PJQ5 311 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 DSTYKQ6XUX3 929 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 LRRC74BQ6ZQY2 392 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 SATL1Q86VE3 508 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 TMEM176AQ96HP8 235 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 SMC6Q96SB8 1091 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 NT5C1AQ9BXI3 368 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 IL1RAPL1Q9NZN1 696 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 A0A1W2PQ67 120 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 MED7O43513 233 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 IGFBP6P24592 240 aaPredicted RBP12.75□□□□□ -0.37
USP11-206ENST00000469080 LMO2P25791 158 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 SDC4P31431 198 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 TSPY1Q01534 308 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 EFTUD2Q15029 972 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■■■■ 27.5
USP11-206ENST00000469080 KHDC1Q4VXA5 237 aaKnown RBP12.75□□□□□ -0.37
USP11-206ENST00000469080 IL31Q6EBC2 164 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 CCSAPQ6IQ19 270 aaPredicted RBP12.75□□□□□ -0.37
USP11-206ENST00000469080 SPOCD1Q6ZMY3 1216 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 AGGF1Q8N302 714 aaeCLIP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms