RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 COL19A1Q14993 1142 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 C10orf120Q5SQS8 335 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 HECTD3Q5T447 861 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 CC2D1AQ6P1N0 951 aaPredicted RBP12.35□□□□□ -0.43
RNF13-208ENST00000467996 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 TADA2BQ86TJ2 420 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 SHKBP1Q8TBC3 707 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 MYLIPQ8WY64 445 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
RNF13-208ENST00000467996 TCEAL4Q96EI5 215 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 PGAP3Q96FM1 320 aaPredicted RBP12.35□□□□□ -0.43
RNF13-208ENST00000467996 CDK5RAP1Q96SZ6 601 aaKnown RBP12.35□□□□□ -0.43
RNF13-208ENST00000467996 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 PIGVQ9NUD9 493 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 DDIT4Q9NX09 232 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 CLDND1Q9NY35 253 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 COX16Q9P0S2 106 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 CLEC1BQ9P126 229 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 AMFRQ9UKV5 643 aa12.35□□□□□ -0.43
RNF13-208ENST00000467996 PACSIN2Q9UNF0 486 aaPredicted RBP12.35□□□□□ -0.43
RNF13-208ENST00000467996 FANCGO15287 622 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 NCK2O43639 380 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 ENDOD1O94919 500 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 OLFM2O95897 454 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 HOXB8P17481 243 aaPredicted RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 MIPP30301 263 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 PCK1P35558 622 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 ATP5C1P36542 298 aaKnown RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 SSR1P43307 286 aaKnown RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 TAS2R40P59535 323 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 ETF1P62495 437 aaKnown RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 SLC25A11Q02978 314 aaKnown RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 EIF4EBP2Q13542 120 aaPredicted RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 TEAD2Q15562 447 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 STXBP5Q5T5C0 1151 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 MEI1Q5TIA1 1274 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 TXNDC8Q6A555 127 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 KLHDC10Q6PID8 442 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 SYT10Q6XYQ8 523 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 GPR149Q86SP6 731 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 MIB1Q86YT6 1006 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 CD101Q93033 1021 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 PABPC5Q96DU9 382 aaKnown RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 GUCD1Q96NT3 240 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 SERPINB11Q96P15 392 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 PEBP4Q96S96 227 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 CDX2Q99626 313 aaPredicted RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 NCAPGQ9BPX3 1015 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 NACA2Q9H009 215 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 WDR6Q9NNW5 1121 aaKnown RBP12.34□□□□□ -0.43
RNF13-208ENST00000467996 MARCH2Q9P0N8 246 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 DNAI1Q9UI46 699 aa12.34□□□□□ -0.43
RNF13-208ENST00000467996 ENC1O14682 589 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 ZNF197O14709 1029 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 F9P00740 461 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 CEBPBP17676 345 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
RNF13-208ENST00000467996 CTNNA2P26232 953 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 IL1R2P27930 398 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 GBP1P32455 592 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 CTNNA1P35221 906 aaKnown RBP12.33□□□□□ -0.44
RNF13-208ENST00000467996 GJC1P36383 396 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 LTBRP36941 435 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 NNTQ13423 1086 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 ARHGAP15Q53QZ3 475 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 GPR158Q5T848 1215 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 TXNRD3NBQ6F5E7 133 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 SCYL2Q6P3W7 929 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 EP400NLQ6ZTU2 488 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 CYP4V2Q6ZWL3 525 aaPredicted RBP12.33□□□□□ -0.44
RNF13-208ENST00000467996 FAM131BQ86XD5 332 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 DEFB123Q8N688 67 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 ARL14EPQ8N8R7 260 aaPredicted RBP12.33□□□□□ -0.44
RNF13-208ENST00000467996 MAB21L3Q8N8X9 362 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 KRT35Q92764 455 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 HES6Q96HZ4 224 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 SLC22A12Q96S37 553 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 TLR10Q9BXR5 811 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 RNF38Q9H0F5 515 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 ADAM7Q9H2U9 754 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.33□□□□□ -0.44
RNF13-208ENST00000467996 PCSK1NQ9UHG2 260 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 CDH22Q9UJ99 828 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 DNMT3LQ9UJW3 386 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 USP18Q9UMW8 372 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 TLR6Q9Y2C9 796 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 JRKLQ9Y4A0 524 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
RNF13-208ENST00000467996 CLUHO75153 1309 aa12.33□□□□□ -0.44
RNF13-208ENST00000467996 KIF26AQ9ULI4 1882 aaPredicted RBP12.32□□□□□ -0.44
RNF13-208ENST00000467996 TRAV19A0A0A6YYK7 116 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 SLC12A8A0AV02 714 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 CCDC66A2RUB6 948 aa12.32□□□□□ -0.44
RNF13-208ENST00000467996 MIF4GDA9UHW6 222 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms