RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 C10orf120Q5SQS8 335 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 HECTD3Q5T447 861 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 KLHDC10Q6PID8 442 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 SFXN1Q9H9B4 322 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 PCSK1NQ9UHG2 260 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 SFMBT1Q9UHJ3 866 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 MTCH2Q9Y6C9 303 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 NOTCH4Q99466 2003 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 PRRC2BQ5JSZ5 2229 aaKnown RBP21.96■■□□□ 1.11
VPS13B-204ENST00000441350 IRAK2O43187 625 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 PRPSAP2O60256 369 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 OAS1P00973 400 aaKnown RBP21.95■■□□□ 1.1
VPS13B-204ENST00000441350 GBP1P32455 592 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 CXCR3P49682 368 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 ADGRE1Q14246 886 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 TADA2BQ86TJ2 420 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 LEMD2Q8NC56 503 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 TMEM51Q9NW97 253 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.95■■□□□ 1.1
VPS13B-204ENST00000441350 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.95■■□□□ 1.1
VPS13B-204ENST00000441350 SYNJ2BP-COX16A0A087WUM0 186 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 FGF19O95750 216 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 KRT7P08729 469 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 MYL4P12829 197 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 CDC25CP30307 473 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 DNA2P51530 1060 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 EFEMP1Q12805 493 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 NNTQ13423 1086 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 BOLA3Q53S33 107 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 DNTTIP2Q5QJE6 756 aaKnown RBP21.95■■□□□ 1.1
VPS13B-204ENST00000441350 DCAF12L1Q5VU92 463 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 SCYL2Q6P3W7 929 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 FAM131BQ86XD5 332 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 KATNAL2Q8IYT4 538 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 C12orf76Q8N812 135 aaPredicted RBP21.95■■□□□ 1.1
VPS13B-204ENST00000441350 LRCH3Q96II8 777 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 SERPINB11Q96P15 392 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 OSBPL9Q96SU4 736 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 MARCH2Q9P0N8 246 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 COX16Q9P0S2 106 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 SAR1BQ9Y6B6 198 aa21.95■■□□□ 1.1
VPS13B-204ENST00000441350 SPDYE4A6NLX3 237 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 NRG2O14511 850 aaPredicted RBP21.94■■□□□ 1.1
VPS13B-204ENST00000441350 MDM4O15151 490 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 LINC01565O15544 149 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 MSI1O43347 362 aaKnown RBP21.94■■□□□ 1.1
VPS13B-204ENST00000441350 COCHO43405 550 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 RHOP08100 348 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 ATP5C1P36542 298 aaKnown RBP21.94■■□□□ 1.1
VPS13B-204ENST00000441350 CCR2P41597 374 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 RWDD2BP57060 319 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 ADAM15Q13444 863 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 ATP13A4Q4VNC1 1196 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 PSMB7Q99436 277 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 ZWILCHQ9H900 591 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 DNMT3LQ9UJW3 386 aa21.94■■□□□ 1.1
VPS13B-204ENST00000441350 C2orf78A6NCI8 922 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 KCNK3O14649 394 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 RARAP10276 462 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 TCP1P17987 556 aaKnown RBP21.93■■□□□ 1.1
VPS13B-204ENST00000441350 SND1Q7KZF4 910 aaKnown RBP eCLIP21.93■■□□□ 1.1
VPS13B-204ENST00000441350 CCDC185Q8N715 623 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 TEKT4Q8WW24 435 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 SMG7Q92540 1137 aaKnown RBP21.93■■□□□ 1.1
VPS13B-204ENST00000441350 MRPS31Q92665 395 aaKnown RBP21.93■■□□□ 1.1
VPS13B-204ENST00000441350 SLC39A13Q96H72 371 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 CARD9Q9H257 536 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 DDX56Q9NY93 547 aaKnown RBP21.93■■□□□ 1.1
VPS13B-204ENST00000441350 TLR6Q9Y2C9 796 aa21.93■■□□□ 1.1
VPS13B-204ENST00000441350 A0A1W2PRU2 124 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 MOSPD3O75425 235 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 OLFM2O95897 454 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 CXCR5P32302 372 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 GJC1P36383 396 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 TRIP4Q15650 581 aaPredicted RBP21.92■■□□□ 1.1
VPS13B-204ENST00000441350 SMTNL2Q2TAL5 461 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 KCNT1Q5JUK3 1230 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 PRSS36Q5K4E3 855 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 TMC5Q6UXY8 1006 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 PDZD4Q76G19 769 aaPredicted RBP21.92■■□□□ 1.1
VPS13B-204ENST00000441350 GRASPQ7Z6J2 395 aaPredicted RBP21.92■■□□□ 1.1
VPS13B-204ENST00000441350 SHKBP1Q8TBC3 707 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 NTAN1Q96AB6 310 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 GCNAQ96QF7 691 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 RNF38Q9H0F5 515 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 ATXN3LQ9H3M9 355 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 REV3LO60673 3130 aa21.92■■□□□ 1.1
VPS13B-204ENST00000441350 CES2O00748 559 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 SRGAP2O75044 1071 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 SRGAP2BP0DMP2 458 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 ADRA1BP35368 520 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 AIF1P55008 147 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 NTHL1P78549 312 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 CYP4F8P98187 520 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 PPP2R5DQ14738 602 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 SLC5A9Q2M3M2 681 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 ERMARDQ5T6L9 678 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 TXNDC8Q6A555 127 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 ANKRD54Q6NXT1 300 aa21.91■■□□□ 1.1
VPS13B-204ENST00000441350 MIB1Q86YT6 1006 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms