RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 GRM6O15303 877 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 ZDHHC11BP0C7U3 371 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 SPATA31D3P0C874 917 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 HMGA1P17096 107 aaKnown RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 IL4RP24394 825 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 ALDH1A3P47895 512 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 UBE3AQ05086 875 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 MMRN1Q13201 1228 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 CYP1B1Q16678 543 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 SPATA31D4Q6ZUB0 917 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 MRPL43Q8N983 215 aaKnown RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 HDAC7Q8WUI4 952 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 UBE2OQ9C0C9 1292 aaKnown RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 TLR8Q9NR97 1041 aaKnown RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 CLIC5Q9NZA1 410 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 SFMBT1Q9UHJ3 866 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 MAFFQ9ULX9 164 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 EFR3BQ9Y2G0 817 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 R3HDM2Q9Y2K5 976 aaKnown RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 PCDHA11Q9Y5I1 949 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 MYO7AQ13402 2215 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 IRAK2O43187 625 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 PHF2O75151 1096 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 F9P00740 461 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 RB1P06400 928 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 ADH1AP07327 375 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 L1CAMP32004 1257 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 PBX2P40425 430 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 CXCR3P49682 368 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 TWF1Q12792 350 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 KRT81Q14533 505 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 PDK2Q15119 407 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 C8orf74Q6P047 294 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 LILRA6Q6PI73 481 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 PYROXD2Q8N2H3 581 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 GPR161Q8N6U8 529 aaKnown RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 RNF139Q8WU17 664 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 MAIP1Q8WWC4 291 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 ATG4AQ8WYN0 398 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 KCTD15Q96SI1 283 aaPredicted RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 DHX35Q9H5Z1 703 aaKnown RBP19.35■□□□□ 0.69
CLN3-206ENST00000360019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.35■□□□□ 0.69
CLN3-206ENST00000360019 FBXW11Q9UKB1 542 aa19.35■□□□□ 0.69
CLN3-206ENST00000360019 TJP3O95049 919 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 RARGP13631 454 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 IRS1P35568 1242 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 PSEN1P49768 467 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 PPP6R3Q5H9R7 873 aaPredicted RBP19.34■□□□□ 0.69
CLN3-206ENST00000360019 MSANTD2Q6P1R3 559 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 TTC27Q6P3X3 843 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 TNS4Q8IZW8 715 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 C12orf50Q8NA57 414 aaPredicted RBP19.34■□□□□ 0.69
CLN3-206ENST00000360019 C1orf54Q8WWF1 131 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 MAGOHBQ96A72 148 aaKnown RBP19.34■□□□□ 0.69
CLN3-206ENST00000360019 NTAN1Q96AB6 310 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 MYRFLQ96LU7 910 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 TGS1Q96RS0 853 aaKnown RBP19.34■□□□□ 0.69
CLN3-206ENST00000360019 EMILIN2Q9BXX0 1053 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 AMACRQ9UHK6 382 aa19.34■□□□□ 0.69
CLN3-206ENST00000360019 MSI1O43347 362 aaKnown RBP19.33■□□□□ 0.69
CLN3-206ENST00000360019 RAD51CO43502 376 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 CSH1P0DML2 217 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 CSH2P0DML3 217 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 ADRA1BP35368 520 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 SCAPQ12770 1279 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 PSTKQ8IV42 348 aaKnown RBP19.33■□□□□ 0.69
CLN3-206ENST00000360019 MAP7D3Q8IWC1 876 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 FAF2Q96CS3 445 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 PNKPQ96T60 521 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 ZNF670Q9BS34 389 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 SLITRK6Q9H5Y7 841 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 LRRC19Q9H756 370 aa19.33■□□□□ 0.69
CLN3-206ENST00000360019 CST8O60676 142 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 TBX18O95935 607 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 KLRC2P26717 231 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 GBP1P32455 592 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 ERVK-21P61565 698 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 DYNLT1P63172 113 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 SLC7A5Q01650 507 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 KCTD19Q17RG1 926 aaPredicted RBP19.32■□□□□ 0.68
CLN3-206ENST00000360019 GLE1Q53GS7 698 aaKnown RBP19.32■□□□□ 0.68
CLN3-206ENST00000360019 BBS12Q6ZW61 710 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 VSIG1Q86XK7 387 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 SAMD11Q96NU1 681 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 RNF157Q96PX1 679 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 FAM118BQ9BPY3 351 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 PBX4Q9BYU1 374 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 DCLK3Q9C098 648 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 TKTL2Q9H0I9 626 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 PLEKHA4Q9H4M7 779 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 WDCPQ9H6R7 721 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 DMGDHQ9UI17 866 aaKnown RBP19.32■□□□□ 0.68
CLN3-206ENST00000360019 CHRNA3P32297 505 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 AIF1P55008 147 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 VEPH1Q14D04 833 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 SND1Q7KZF4 910 aaKnown RBP eCLIP19.32■□□□□ 0.681e-7■■■□□ 15.8
CLN3-206ENST00000360019 RFX6Q8HWS3 928 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 OVCA2Q8WZ82 227 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 PSMG2Q969U7 264 aa19.32■□□□□ 0.68
CLN3-206ENST00000360019 TRMT2BQ96GJ1 504 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms