RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SPATA5Q8NB90 893 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 FBXO18Q8NFZ0 1043 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 STON2Q8WXE9 905 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 LRTOMTQ8WZ04 291 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 NEIL1Q96FI4 390 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 CEP95Q96GE4 821 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 STRBPQ96SI9 672 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 MPHOSPH6Q99547 160 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 FSD1Q9BTV5 496 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 NAA15Q9BXJ9 866 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 UPF3BQ9BZI7 483 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 DHX36Q9H2U1 1008 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 WDCPQ9H6R7 721 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 SEC61A2Q9H9S3 476 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 ATP6V0A4Q9HBG4 840 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 GOLGA2P5Q9HBQ8 144 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 PNPOQ9NVS9 261 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 ACTL7AQ9Y615 435 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 CEP250Q9BV73 2442 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 NLRC5Q86WI3 1866 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 PKD1L2Q7Z442 2459 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 MYH8P13535 1937 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 FASNP49327 2511 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 A0A1B0GUL7 405 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 H3BUI4 141 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 HLA-DOAP06340 250 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 IFIT2P09913 472 aaKnown RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 IQCF3P0C7M6 154 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ACTN1P12814 892 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 SP100P23497 879 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 SMARCA1P28370 1054 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 SHMT1P34896 483 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ALDH1A3P47895 512 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ZXDAP98168 799 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 TNFAIP2Q03169 654 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 POLD3Q15054 466 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ZNF124Q15973 351 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 HERC4Q5GLZ8 1057 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 AFMIDQ63HM1 303 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 APOA5Q6Q788 366 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 DGLUCYQ7Z3D6 616 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 PLXDC1Q8IUK5 500 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 SIAH1Q8IUQ4 282 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 KIAA2013Q8IYS2 634 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 GPR135Q8IZ08 494 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ABRAQ8N0Z2 381 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 LGI4Q8N135 537 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 DCBLD1Q8N8Z6 715 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 BORCS6Q96GS4 357 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 PKNOX2Q96KN3 472 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 NT5C1BQ96P26 610 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 TGS1Q96RS0 853 aaKnown RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 C22orf23Q9BZE7 217 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ALDH8A1Q9H2A2 487 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ARMT1Q9H993 441 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 AGO3Q9H9G7 860 aaKnown RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 NCDNQ9UBB6 729 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 FEZ2Q9UHY8 353 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-214ENST00000572365 PHTF1Q9UMS5 762 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 OAZ3Q9UMX2 235 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 PCDHGB6Q9Y5F9 930 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 COMMD10Q9Y6G5 202 aa6.2□□□□□ -1.42
SF3B3-214ENST00000572365 ANKRD11Q6UB99 2663 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 UBE2QL1A1L167 161 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 CFAP69A5D8W1 941 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 PHGDHO43175 533 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 TPD52L2O43399 206 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 BAG3O95817 575 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 MYL3P08590 195 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 CYP2D6P10635 497 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 HTR3AP46098 478 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 WDR5P61964 334 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 PPP2CBP62714 309 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 PPP2CAP67775 309 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 DDX10Q13206 875 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 GPNMBQ14956 572 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 RALBP1Q15311 655 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 FLYWCH1Q4VC44 716 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 NT5DC1Q5TFE4 455 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 TATDN1Q6P1N9 297 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.19□□□□□ -1.429e-8■□□□□ 11
SF3B3-214ENST00000572365 RPAINQ86UA6 219 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 FAM90A1Q86YD7 464 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 DYNLL2Q96FJ2 89 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 RPGRIP1Q96KN7 1286 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 TCF25Q9BQ70 676 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 C11orf54Q9H0W9 315 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 UPF3AQ9H1J1 476 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 NUP62CLQ9H1M0 184 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 ZMAT3Q9HA38 289 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 KLHL11Q9NVR0 708 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 SIDT1Q9NXL6 827 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 NRBP1Q9UHY1 535 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 MICAL3Q7RTP6 2002 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 NAV1Q8NEY1 1877 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 FRYQ5TBA9 3013 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 SETXQ7Z333 2677 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 BAZ2AQ9UIF9 1905 aaKnown RBP6.19□□□□□ -1.42
SF3B3-214ENST00000572365 ASPMQ8IZT6 3477 aa6.19□□□□□ -1.42
SF3B3-214ENST00000572365 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 1009.1 ms