RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 FAM149B1Q96BN6 582 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 OLA1Q9NTK5 396 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 DUS2Q9NX74 493 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 MARCH2Q9P0N8 246 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 SFMBT1Q9UHJ3 866 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 RASAL2Q9UJF2 1139 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 WNT6Q9Y6F9 365 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 TECTAO75443 2155 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 E2F8A0AVK6 867 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 KRBA1A5PL33 1030 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 SCAMP3O14828 347 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 GLI1P08151 1106 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 NCAM1P13591 858 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 ARSAP15289 507 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 ZNF75DP51815 510 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 COG7P83436 770 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 CENPCQ03188 943 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 PTP4A2Q12974 167 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 TBX2Q13207 712 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 EML3Q32P44 896 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 MSANTD2Q6P1R3 559 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 MMS22LQ6ZRQ5 1243 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 HTR3DQ70Z44 454 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 XYLT1Q86Y38 959 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 ZDHHC17Q8IUH5 632 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 IPO4Q8TEX9 1081 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 EBF3Q9H4W6 596 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 POPDC2Q9HBU9 364 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 HPS4Q9NQG7 708 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 HEBP1Q9NRV9 189 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 SEPT11Q9NVA2 429 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 GTSE1Q9NYZ3 720 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 FBXL21Q9UKT6 434 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 STRIP2Q9ULQ0 834 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 CA14Q9ULX7 337 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 SH3BP1Q9Y3L3 701 aa12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 HELZP42694 1942 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-218ENST00000560777 SLC12A8A0AV02 714 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 TMEM221A6NGB7 291 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 SHISA7A6NL88 538 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 M0R296 226 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 GRAP2O75791 330 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 STC2O76061 302 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 KLKB1P03952 638 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 SERPING1P05155 500 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 IRF1P10914 325 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 HNRNPH3P31942 346 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 NSFP46459 744 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 RUNX3Q13761 415 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 TRIM14Q14142 442 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 ARID5BQ14865 1188 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 PDGFRLQ15198 375 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 ACAD10Q6JQN1 1059 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 TOGARAM2Q6ZUX3 1019 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 SLC26A9Q7LBE3 791 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 PHF13Q86YI8 300 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 DEFB106AQ8N104 65 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 SIX5Q8N196 739 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 TTC8Q8TAM2 541 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 CSGALNACT1Q8TDX6 532 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 SLC2A13Q96QE2 648 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 TRIM62Q9BVG3 475 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 TAS2R14Q9NYV8 317 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 TBC1D14Q9P2M4 693 aa12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 BZW2Q9Y6E2 419 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-218ENST00000560777 SLC9A3R1O14745 358 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 CAPN9O14815 690 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 MSI1O43347 362 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 HSF2BPO75031 334 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 PDGFBP01127 241 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 HMBSP08397 361 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 SCNN1AP37088 669 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 IFNAR2P48551 515 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 MLLT6P55198 1093 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 STARD6P59095 220 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 RNASE9P60153 205 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 PITX1P78337 314 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 EIF4EBP2Q13542 120 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 MLF2Q15773 248 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 ITPRIPL2Q3MIP1 535 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 DCAF6Q58WW2 860 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 Q6ZNB5 142 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 TMC6Q7Z403 805 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 PHLDB2Q86SQ0 1253 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 BBS7Q8IWZ6 715 aa12.47□□□□□ -0.41
RABGGTA-218ENST00000560777 DRC7Q8IY82 874 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms