RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 IFT74Q96LB3 600 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 DACH2Q96NX9 599 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 NOX5Q96PH1 765 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 GBP5Q96PP8 586 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 RAD9AQ99638 391 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 BCL7BQ9BQE9 202 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PYM1Q9BRP8 204 aaKnown RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PHF20Q9BVI0 1012 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TRIM4Q9C037 500 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM107BQ9H098 131 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 KCNH6Q9H252 994 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SCPEP1Q9HB40 452 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ERVK-5Q9HDB9 667 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 BATF3Q9NR55 127 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TOMM22Q9NS69 142 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SIRT3Q9NTG7 399 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 INTS13Q9NVM9 706 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 C14orf119Q9NWQ9 140 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TUBGCP4Q9UGJ1 667 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ANAPC5Q9UJX4 755 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 DDX19BQ9UMR2 479 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CLCA2Q9UQC9 943 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CAMK2AQ9UQM7 478 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PIN4Q9Y237 131 aaKnown RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CSADQ9Y600 493 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SLC12A7Q9Y666 1083 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 RPAP1Q9BWH6 1393 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SH3TC1Q8TE82 1336 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 A0A0U1RQK1 487 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 TCRBV16S1A1N1A0A5B0 115 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZNF320A2RRD8 509 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 NCF1BA6NI72 391 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 MEIS3P2A8K0S8 358 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 NCF1CA8MVU1 366 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 B4E1Z4 1266 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 E9PBE3 544 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 H0YCG3 227 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 K7ERQ8 282 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 KRIT1O00522 736 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 UBE2CO00762 179 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 TUSC2O75896 110 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 TOMM70O94826 608 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 CSPG5O95196 566 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 GGPS1O95749 300 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 CAVIN2O95810 425 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 LMNAP02545 664 aaKnown RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 LRG1P02750 347 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 AFPP02771 609 aaKnown RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 SOD2P04179 222 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 THP07101 528 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ASNSP08243 561 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 CLTAP09496 248 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 INHBBP09529 407 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ACADMP11310 421 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 FGFR1P11362 822 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 PABPC1P11940 636 aaKnown RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 KRT3P12035 628 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 PRG2P13727 222 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 TYMPP19971 482 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 BMP6P22004 513 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 TBXAS1P24557 533 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ANXA13P27216 316 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 PRKAR2BP31323 418 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 TTKP33981 857 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 EVI2BP34910 448 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 RFC2P35250 354 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 NUP62P37198 522 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 BUD31P41223 144 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 GRIA2P42262 883 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ACADSBP45954 432 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 GCLCP48506 637 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 NT5C2P49902 561 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZNF41P51814 821 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 NR1H2P55055 460 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ABATP80404 500 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 EPS8Q12929 822 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ITGA7Q13683 1181 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 RCN2Q14257 317 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 LRRC32Q14392 662 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 PUM1Q14671 1186 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 CASP8Q14790 479 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 KRT31Q15323 416 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 AANATQ16613 207 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 FAM209BQ5JX69 171 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 SFRP5Q5T4F7 317 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 TBC1D9BQ66K14 1250 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 SHQ1Q6PI26 577 aaKnown RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 METAP1DQ6UB28 335 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 NSMFQ6X4W1 530 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ZNF704Q6ZNC4 412 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 UNC13DQ70J99 1090 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 KRT28Q7Z3Y7 464 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 PIWIL3Q7Z3Z3 882 aaKnown RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 METTL23Q86XA0 190 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 ST13P4Q8IZP2 240 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 BBS5Q8N3I7 341 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 MFSD4AQ8N468 514 aa4.71□□□□□ -1.66
HMGB3P26-201ENST00000560051 CLRN3Q8NCR9 226 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms