RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TRPM5Q9NZQ8 1165 aa16.31■□□□□ 0.2
LINC01220-201ENST00000558575 WDFY3Q8IZQ1 3526 aa16.31■□□□□ 0.2
LINC01220-201ENST00000558575 IGSF10Q6WRI0 2623 aa16.31■□□□□ 0.2
LINC01220-201ENST00000558575 PIK3R2O00459 728 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 USP17L7P0C7H9 530 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 WEE1P30291 646 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 VIPR2P41587 438 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 TKTL1P51854 596 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 SRSF5Q13243 272 aaKnown RBP16.3■□□□□ 0.2
LINC01220-201ENST00000558575 TAF3Q5VWG9 929 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 CCDC186Q7Z3E2 898 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 CACNA2D4Q7Z3S7 1137 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 ARID3BQ8IVW6 561 aaPredicted RBP16.3■□□□□ 0.2
LINC01220-201ENST00000558575 CMTM8Q8IZV2 173 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 STK32AQ8WU08 396 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 OVCA2Q8WZ82 227 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 MRPS31Q92665 395 aaKnown RBP16.3■□□□□ 0.2
LINC01220-201ENST00000558575 SMARCD2Q92925 531 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 HSFY1Q96LI6 401 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 SLITRK1Q96PX8 696 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 NELL2Q99435 816 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 EDEM3Q9BZQ6 932 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 SMG9Q9H0W8 520 aaKnown RBP16.3■□□□□ 0.2
LINC01220-201ENST00000558575 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 FBXO44Q9H4M3 255 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 TRPV4Q9HBA0 871 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 HEBP1Q9NRV9 189 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 TJP2Q9UDY2 1190 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 LAMA1P25391 3075 aa16.3■□□□□ 0.2
LINC01220-201ENST00000558575 KIF26AQ9ULI4 1882 aaPredicted RBP16.29■□□□□ 0.2
LINC01220-201ENST00000558575 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 LRRC53A6NM62 1247 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 SOBPA7XYQ1 873 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 NCAM2O15394 837 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 HRO43593 1189 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 PRAMEF12O95522 483 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 OAS1P00973 400 aaKnown RBP16.29■□□□□ 0.2
LINC01220-201ENST00000558575 MMEP08473 750 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 PPP3CCP48454 512 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 NRLP54845 237 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 SLC8A3P57103 927 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 ZXDBP98169 803 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 ARID5AQ03989 594 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 ADIGQ0VDE8 80 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 ARHGAP15Q53QZ3 475 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 IL31Q6EBC2 164 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 UNQ6494/PRO21346Q6UXR6 183 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 ZNF852Q6ZMS4 543 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 TMEM110Q86TL2 294 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 ARL14EPQ8N8R7 260 aaPredicted RBP16.29■□□□□ 0.2
LINC01220-201ENST00000558575 OLIG1Q8TAK6 271 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 PCDHB18PQ96TA0 734 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 SYT11Q9BT88 431 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 SLITRK6Q9H5Y7 841 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 LRRC4Q9HBW1 653 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 MYO6Q9UM54 1294 aa16.29■□□□□ 0.2
LINC01220-201ENST00000558575 MYH10P35580 1976 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 ZNF638Q14966 1978 aaKnown RBP16.28■□□□□ 0.2
LINC01220-201ENST00000558575 CBFA2T2O43439 604 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 OLFM2O95897 454 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 ZBED1O96006 694 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 ABL1P00519 1130 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 LCP1P13796 627 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 HDCP19113 662 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 DDX6P26196 483 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC01220-201ENST00000558575 CDH5P33151 784 aaPredicted RBP16.28■□□□□ 0.2
LINC01220-201ENST00000558575 KRT9P35527 623 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 FMO1Q01740 532 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 SIM2Q14190 667 aaPredicted RBP16.28■□□□□ 0.2
LINC01220-201ENST00000558575 VSTM4Q8IW00 320 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 PDZD8Q8NEN9 1154 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 RIN3Q8TB24 985 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 CLEC4CQ8WTT0 213 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 USP13Q92995 863 aaPredicted RBP16.28■□□□□ 0.2
LINC01220-201ENST00000558575 NUP58Q9BVL2 599 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 CCSER2Q9H7U1 834 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 TRPC7Q9HCX4 862 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 RXFP3Q9NSD7 469 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 AIPL1Q9NZN9 384 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 CAPN11Q9UMQ6 739 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 NDRG2Q9UN36 371 aaKnown RBP16.28■□□□□ 0.2
LINC01220-201ENST00000558575 CCL26Q9Y258 94 aa16.28■□□□□ 0.2
LINC01220-201ENST00000558575 HELZ2Q9BYK8 2649 aaKnown RBP16.28■□□□□ 0.2
LINC01220-201ENST00000558575 DMXL2Q8TDJ6 3036 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 ITIH6Q6UXX5 1313 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 A0A1W2PQJ5 194 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 YJEFN3A6XGL0 299 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 E7ENQ6 273 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 TBX18O95935 607 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 GYPCP04921 128 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 PDE6CP51160 858 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 LIMK1P53667 647 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 DAOAP59103 153 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 PLCB2Q00722 1185 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 CDR2Q01850 454 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 PDCLQ13371 301 aa16.27■□□□□ 0.2
LINC01220-201ENST00000558575 SF3A2Q15428 464 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 959.4 ms