RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FCRL5Q96RD9 977 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 TM2D2Q9BX73 214 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 VN1R3Q9BXE9 311 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ZNF556Q9HAH1 456 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 USP29Q9HBJ7 922 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 AGO4Q9HCK5 861 aaKnown RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 MLXIPLQ9NP71 852 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ARL8BQ9NVJ2 186 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 SLC5A4Q9NY91 659 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 NCKIPSDQ9NZQ3 722 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 FZD4Q9ULV1 537 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 MYO6Q9UM54 1294 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 PCDHA6Q9UN73 950 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 PCDHGB1Q9Y5G3 927 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 HEMK1Q9Y5R4 338 aaPredicted RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 SIRT4Q9Y6E7 314 aaPredicted RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.07□□□□□ -2.242e-6■■□□□ 11.6
COPB1-212ENST00000534771 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 A0A1B0GUV1 79 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 SLC22A23A1A5C7 686 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 EXOC5O00471 708 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 RRHO14718 337 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 PHGDHO43175 533 aaKnown RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 MT-CO1P00395 513 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 MYBL2P10244 700 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 RPS6KB1P23443 525 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 HOXA7P31268 230 aaPredicted RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 UQCRC1P31930 480 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 IARSP41252 1262 aaKnown RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 RFX2P48378 723 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 MTHFSP49914 203 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 JAK3P52333 1124 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 MAP2K6P52564 334 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 KRT85P78386 507 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 DEUP1Q05D60 604 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 POU5F1BQ06416 359 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 PLS1Q14651 629 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 PCBP2Q15366 365 aaKnown RBP eCLIP1.06□□□□□ -2.242e-11■■■■■ 33.8
COPB1-212ENST00000534771 DLGAP5Q15398 846 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 LMBRD2Q68DH5 695 aaPredicted RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 KRTAP5-7Q6L8G8 165 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 KRT26Q7Z3Y9 468 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 JAZF1Q86VZ6 243 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 UEVLDQ8IX04 471 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 CBARPQ8N350 705 aaPredicted RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 PRR18Q8N4B5 295 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 PNPLA1Q8N8W4 532 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 DBF4BQ8NFT6 615 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 CENPIQ92674 756 aaPredicted RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 SLC35A4Q96G79 324 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 P2RY11Q96G91 374 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 HES6Q96HZ4 224 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 VPS50Q96JG6 964 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 ZBTB45Q96K62 511 aaPredicted RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 GATA5Q9BWX5 397 aaPredicted RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 TRIM5Q9C035 493 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 TRIM36Q9NQ86 728 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 CNNM1Q9NRU3 951 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 THSD1Q9NS62 852 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 SEMA5BQ9P283 1151 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 KCNG2Q9UJ96 466 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 AGO2Q9UKV8 859 aaKnown RBP1.06□□□□□ -2.24
COPB1-212ENST00000534771 SPATA31A1Q5TZJ5 1347 aa1.06□□□□□ -2.24
COPB1-212ENST00000534771 A0A0G2JK05 382 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 KIR2DS5A0A0G2JLQ3 304 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 SHTN1A0MZ66 631 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ANTXRLA6NF34 631 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 OR6C75A6NL08 312 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 SRRM3A6NNA2 597 aaPredicted RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 SMTNL1A8MU46 457 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 A8MVJ9 347 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 KIR2DS3K7RE56 304 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 RGS10O43665 173 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 DTNBO60941 627 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 KRT36O76013 467 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 IGLV2-11P01706 119 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 SP1P08047 785 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 POU2F2P09086 479 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 CHRNB1P11230 501 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ST6GAL1P15907 406 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 CCND1P24385 295 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 HOXD3P31249 432 aaPredicted RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 KRT2P35908 639 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 PCYT1AP49585 367 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 VEGFCP49767 419 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 GATMP50440 423 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 GPC5P78333 572 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ROR2Q01974 943 aaKnown RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 EEF1A2Q05639 463 aaKnown RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 CRYZQ08257 329 aaKnown RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 DSC1Q08554 894 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 CCDC15Q0P6D6 951 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 CTBP1Q13363 440 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ODF1Q14990 250 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 SMTNL2Q2TAL5 461 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 PGS1Q32NB8 556 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ODF3L2Q3SX64 289 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 ZNF672Q499Z4 452 aaPredicted RBP1.05□□□□□ -2.24
COPB1-212ENST00000534771 FAM76BQ5HYJ3 339 aa1.05□□□□□ -2.24
COPB1-212ENST00000534771 PIK3CD-AS1Q5SR53 167 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms