RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 PAK6Q9NQU5 681 aaPredicted RBP17.54■□□□□ 0.4
SREK1-212ENST00000522912 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
SREK1-212ENST00000522912 DNAJB4Q9UDY4 337 aa17.54■□□□□ 0.4
SREK1-212ENST00000522912 FZD10Q9ULW2 581 aa17.54■□□□□ 0.4
SREK1-212ENST00000522912 PCDHB8Q9UN66 801 aa17.54■□□□□ 0.4
SREK1-212ENST00000522912 SCN5AQ14524 2016 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 PATJQ8NI35 1801 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 M0QYT0 321 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 TGM2P21980 687 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 NRLP54845 237 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 BCAR1P56945 870 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 ROR1Q01973 937 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 MORF4L2Q15014 288 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 KYNUQ16719 465 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 TCTN1Q2MV58 587 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 PLEKHG4Q58EX7 1191 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 DARS2Q6PI48 645 aaKnown RBP17.53■□□□□ 0.4
SREK1-212ENST00000522912 THEM5Q8N1Q8 247 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 TMPRSS4Q9NRS4 437 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 NINJ2Q9NZG7 142 aa17.53■□□□□ 0.4
SREK1-212ENST00000522912 BCCIPQ9P287 314 aaKnown RBP eCLIP17.53■□□□□ 0.4
SREK1-212ENST00000522912 SYNJ2BP-COX16A0A087WUM0 186 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 ACSL3O95573 720 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 TTC4O95801 387 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 SKOR1P84550 965 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 DMTNQ08495 405 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 TMEM109Q9BVC6 243 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 SEZ6LQ9BYH1 1024 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 FOXP3Q9BZS1 431 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 CWC15Q9P013 229 aaKnown RBP17.52■□□□□ 0.4
SREK1-212ENST00000522912 COX16Q9P0S2 106 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 STAP1Q9ULZ2 295 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 HEY1Q9Y5J3 304 aa17.52■□□□□ 0.4
SREK1-212ENST00000522912 ARHGEF37A1IGU5 675 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 H7C0C1 242 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 TMEM189-UBE2V1I3L0A0 370 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 MAP3K6O95382 1288 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 ZBED1O96006 694 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 NR1D1P20393 614 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 OR1G1P47890 313 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 ATP5OP48047 213 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 CTCFP49711 727 aaPredicted RBP17.52■□□□□ 0.39
SREK1-212ENST00000522912 RNASELQ05823 741 aaKnown RBP17.52■□□□□ 0.39
SREK1-212ENST00000522912 EMC10Q5UCC4 262 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 KDM7AQ6ZMT4 941 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 ZNF771Q7L3S4 317 aaPredicted RBP17.52■□□□□ 0.39
SREK1-212ENST00000522912 RELL1Q8IUW5 271 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 PRCCQ92733 491 aaPredicted RBP17.52■□□□□ 0.39
SREK1-212ENST00000522912 CSPG4P5Q96PW8 444 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 RBM15Q96T37 977 aaKnown RBP eCLIP17.52■□□□□ 0.392e-7■■□□□ 13
SREK1-212ENST00000522912 USP29Q9HBJ7 922 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 PIGVQ9NUD9 493 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 KANSL3Q9P2N6 904 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 NOVA2Q9UNW9 492 aaKnown RBP17.52■□□□□ 0.39
SREK1-212ENST00000522912 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.39
SREK1-212ENST00000522912 USP3Q9Y6I4 520 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 VWA8A3KMH1 1905 aa17.52■□□□□ 0.39
SREK1-212ENST00000522912 DCDC2CA8MYV0 355 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 LTFP02788 710 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 COL6A1P12109 1028 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 RDXP35241 583 aaKnown RBP17.51■□□□□ 0.39
SREK1-212ENST00000522912 ATP1A2P50993 1020 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 TSPY1Q01534 308 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 YWHAHQ04917 246 aaPredicted RBP17.51■□□□□ 0.39
SREK1-212ENST00000522912 NME3Q13232 169 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 FAM182AQ5T1J6 154 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 ANKRD22Q5VYY1 191 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 HOOK3Q86VS8 718 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 CPT1BQ92523 772 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 DMAP1Q9NPF5 467 aaPredicted RBP17.51■□□□□ 0.39
SREK1-212ENST00000522912 SHOC2Q9UQ13 582 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 PRG3Q9Y2Y8 225 aaPredicted RBP17.51■□□□□ 0.39
SREK1-212ENST00000522912 TTC3P53804 2025 aa17.51■□□□□ 0.39
SREK1-212ENST00000522912 TLDC2A0PJX2 215 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 CAPN9O14815 690 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 GOT1P17174 413 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 STIP1P31948 543 aaKnown RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 MAGEA4P43358 317 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 GATMP50440 423 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 DEUP1Q05D60 604 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 SLC10A2Q12908 348 aaPredicted RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 PM20D1Q6GTS8 502 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 TAB3Q8N5C8 712 aaPredicted RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 SLC7A14Q8TBB6 771 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 ADAM32Q8TC27 787 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 EPS8L3Q8TE67 593 aaKnown RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 TLCD1Q96CP7 247 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 C9orf72Q96LT7 481 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 ELAC1Q9H777 363 aaKnown RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 ETNK2Q9NVF9 386 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 OGDHLQ9ULD0 1010 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 MFHAS1Q9Y4C4 1052 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 COL4A4P53420 1690 aaPredicted RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 SMIM23A6NLE4 172 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 PQBP1O60828 265 aaKnown RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 SHOX2O60902 331 aaPredicted RBP17.5■□□□□ 0.39
SREK1-212ENST00000522912 OR4Q2P0C623 313 aa17.5■□□□□ 0.39
SREK1-212ENST00000522912 CAPN2P17655 700 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms