RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CYTH4Q9UIA0 394 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 CHKBQ9Y259 395 aa19.04■□□□□ 0.64
SDC2-202ENST00000518385 TPBGLP0DKB5 382 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 ZNF252P-AS1Q0IIN9 211 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 NFX1Q12986 1120 aaKnown RBP19.03■□□□□ 0.64
SDC2-202ENST00000518385 KLHL38Q2WGJ6 581 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 C11orf91Q3C1V1 193 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 SV2CQ496J9 727 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 LIMS2Q7Z4I7 341 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 MICAL1Q8TDZ2 1067 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 PRCCQ92733 491 aaPredicted RBP19.03■□□□□ 0.64
SDC2-202ENST00000518385 CPXM1Q96SM3 734 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 SH3GL3Q99963 347 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 VCXQ9H320 206 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 TUBGCP4Q9UGJ1 667 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 HES2Q9Y543 173 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 IPPQ9Y573 584 aa19.03■□□□□ 0.64
SDC2-202ENST00000518385 TGDSO95455 350 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 HSPA1AP0DMV8 641 aaKnown RBP19.02■□□□□ 0.64
SDC2-202ENST00000518385 HSPA1BP0DMV9 641 aaKnown RBP19.02■□□□□ 0.64
SDC2-202ENST00000518385 RALAP11233 206 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 IBSPP21815 317 aaPredicted RBP19.02■□□□□ 0.64
SDC2-202ENST00000518385 PSMA2P25787 234 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 LRPAP1P30533 357 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 TAF6P49848 677 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 MNX1P50219 401 aaPredicted RBP19.02■□□□□ 0.64
SDC2-202ENST00000518385 LPIN1Q14693 890 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 EFHC2Q5JST6 749 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 CYP4A22Q5TCH4 519 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 TRAF7Q6Q0C0 670 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 ZDHHC17Q8IUH5 632 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 FAM126BQ8IXS8 530 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 CRYBG2Q8N1P7 616 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 ARHGAP24Q8N264 748 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 ANKLE1Q8NAG6 615 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 UTP4Q969X6 686 aaKnown RBP19.02■□□□□ 0.64
SDC2-202ENST00000518385 VPS11Q9H270 941 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 SLC38A7Q9NVC3 462 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 TSPAN16Q9UKR8 245 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 PADI3Q9ULW8 664 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 CEP350Q5VT06 3117 aa19.02■□□□□ 0.64
SDC2-202ENST00000518385 TRIP11Q15643 1979 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 LRRD1A4D1F6 860 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 KPNA7A9QM74 516 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 F8VP50 259 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 LIASO43766 372 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 CCDC22O60826 627 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 DNAJC6O75061 913 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 ERBB2P04626 1255 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 FESP07332 822 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 AKAP5P24588 427 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 RFC1P35251 1148 aaPredicted RBP19.02■□□□□ 0.63
SDC2-202ENST00000518385 TWF2Q6IBS0 349 aaKnown RBP19.02■□□□□ 0.63
SDC2-202ENST00000518385 IRGCQ6NXR0 463 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 GSTA5Q7RTV2 222 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 ALLCQ8N6M5 410 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 SMG8Q8ND04 991 aaKnown RBP19.02■□□□□ 0.63
SDC2-202ENST00000518385 FAM13CQ8NE31 585 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 NKD2Q969F2 451 aaPredicted RBP19.02■□□□□ 0.63
SDC2-202ENST00000518385 C18orf25Q96B23 403 aaPredicted RBP19.02■□□□□ 0.63
SDC2-202ENST00000518385 SLITRK1Q96PX8 696 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 CCDC28BQ9BUN5 200 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 PCDH9Q9HC56 1237 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 SAYSD1Q9NPB0 183 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 ASNSD1Q9NWL6 643 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 HESX1Q9UBX0 185 aa19.02■□□□□ 0.63
SDC2-202ENST00000518385 GOLGA8SH3BPF8 625 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 TYROBPO43914 113 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 RNF8O76064 485 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 ITGAVP06756 1048 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 GSTA2P09210 222 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 KRT15P19012 456 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 CD52P31358 61 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 OGDHQ02218 1023 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 CBLBQ13191 982 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 P3H1Q32P28 736 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 PKDCCQ504Y2 493 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 TOP6BLQ8N6T0 577 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 ATG4AQ8WYN0 398 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 APBB2Q92870 758 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 SLC7A6OSQ96CW6 309 aaPredicted RBP19.01■□□□□ 0.63
SDC2-202ENST00000518385 NUDCD1Q96RS6 583 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 MRPL45Q9BRJ2 306 aaKnown RBP19.01■□□□□ 0.63
SDC2-202ENST00000518385 TBC1D10AQ9BXI6 508 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 OSBPL1AQ9BXW6 950 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 ZFP69BQ9UJL9 534 aa19.01■□□□□ 0.63
SDC2-202ENST00000518385 KRT1P04264 644 aa19■□□□□ 0.63
SDC2-202ENST00000518385 NEFHP12036 1026 aa19■□□□□ 0.63
SDC2-202ENST00000518385 DESP17661 470 aa19■□□□□ 0.63
SDC2-202ENST00000518385 CA4P22748 312 aa19■□□□□ 0.63
SDC2-202ENST00000518385 PCK1P35558 622 aa19■□□□□ 0.63
SDC2-202ENST00000518385 SCNN1AP37088 669 aa19■□□□□ 0.63
SDC2-202ENST00000518385 GEMIN4P57678 1058 aaKnown RBP19■□□□□ 0.63
SDC2-202ENST00000518385 KRT72Q14CN4 511 aa19■□□□□ 0.63
SDC2-202ENST00000518385 SOWAHAQ2M3V2 549 aa19■□□□□ 0.63
SDC2-202ENST00000518385 TFDP3Q5H9I0 405 aa19■□□□□ 0.63
SDC2-202ENST00000518385 SLC39A5Q6ZMH5 540 aa19■□□□□ 0.63
SDC2-202ENST00000518385 TMEM110Q86TL2 294 aa19■□□□□ 0.63
SDC2-202ENST00000518385 LONP2Q86WA8 852 aa19■□□□□ 0.63
SDC2-202ENST00000518385 TTC13Q8NBP0 860 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms