RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 COBLL1Q53SF7 1204 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 CC2D1BQ5T0F9 858 aaKnown RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 DENND2CQ68D51 928 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 RANBP10Q6VN20 620 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 P3H2Q8IVL5 708 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 SDR16C5Q8N3Y7 309 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 C12orf76Q8N812 135 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 PNPLA1Q8N8W4 532 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 ATP11CQ8NB49 1132 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 MBD3L2Q8NHZ7 208 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 IGFBPL1Q8WX77 278 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZDHHC12Q96GR4 267 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 FAM227BQ96M60 508 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 TBCBQ99426 244 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 PCDHB2Q9Y5E7 798 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 C16orf96A6NNT2 1141 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 PMM2O15305 246 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 THAP12O43422 761 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 CBFA2T3O75081 653 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 RNF8O76064 485 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 TXNL4AP83876 142 aaKnown RBP4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 GPS1Q13098 491 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 CLCA4Q14CN2 919 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 AASDHQ4L235 1098 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 ABLIM2Q6H8Q1 611 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 MZT2AQ6P582 158 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 SHC4Q6S5L8 630 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 KRT28Q7Z3Y7 464 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 NANOGP1Q8N7R0 232 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 NRACQ8N912 160 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 PRSS3P2Q8NHM4 247 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 SUN3Q8TAQ9 357 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 VPS50Q96JG6 964 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 GAR1Q9NY12 217 aaKnown RBP4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 TUBA8Q9NY65 449 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 MTMR4Q9NYA4 1195 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 FZD4Q9ULV1 537 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 VPS4AQ9UN37 437 aa4.04□□□□□ -1.76
HMGB1P29-201ENST00000505659 A0A1W2PPC4 97 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 RRHO14718 337 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 NCK2O43639 380 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 NDST3O95803 873 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 TMIGD3P0DMS9 266 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 MST1P26927 711 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 PTGER1P34995 402 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 THBS4P35443 961 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 STT3AP46977 705 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 GHRHRQ02643 423 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF91Q05481 1191 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 PMS2P11Q13670 270 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 ACOX1Q15067 660 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 RAP1GAP2Q684P5 730 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 VSTM1Q6UX27 236 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 CCDC28AQ8IWP9 274 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF366Q8N895 744 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 FAM71DQ8N9W8 422 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZBTB9Q96C00 473 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 FCRL4Q96PJ5 515 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 SARGQ9BW04 601 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 NAA15Q9BXJ9 866 aaKnown RBP4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 MLXIPLQ9NP71 852 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 TMEM184CQ9NVA4 438 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 AFG3L2Q9Y4W6 797 aa4.03□□□□□ -1.76
HMGB1P29-201ENST00000505659 CLCA1A8K7I4 914 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 FOXN3O00409 490 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 APOL1O14791 398 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 HARSP12081 509 aaKnown RBP4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 DRD1P21728 446 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 CFHR1Q03591 330 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 CCDC15Q0P6D6 951 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 DNASE1L3Q13609 305 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 TRIP6Q15654 476 aaKnown RBP4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 ARHGAP15Q53QZ3 475 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 FAXCQ5TGI0 409 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 KIAA0408Q6ZU52 694 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 TFAP2DQ7Z6R9 452 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 NGDNQ8NEJ9 315 aaKnown RBP4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 COQ8BQ96D53 544 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 NAF1Q96HR8 494 aaKnown RBP4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 HIC2Q96JB3 615 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 SIGLEC11Q96RL6 698 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 WDR24Q96S15 920 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 TM2D2Q9BX73 214 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 MYO1AQ9UBC5 1043 aa4.02□□□□□ -1.77
HMGB1P29-201ENST00000505659 PRF1P14222 555 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 PECAM1P16284 738 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 GABRB3P28472 473 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 NR4A2P43354 598 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 WDR5P61964 334 aaKnown RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 GAB1Q13480 694 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 BFSP2Q13515 415 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 SAFBQ15424 915 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 RBMS2Q15434 407 aaKnown RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 TRIM71Q2Q1W2 868 aaKnown RBP4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 C4orf46Q504U0 113 aa4.01□□□□□ -1.77
HMGB1P29-201ENST00000505659 TMEM196Q5HYL7 178 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms