RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 B3GALNT2Q8NCR0 500 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 P2RY11Q96G91 374 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 EPSTI1Q96J88 318 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 WDR35Q9P2L0 1181 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 PCDHB13Q9Y5F0 798 aa16.53■□□□□ 0.24
HDAC6-236ENST00000498808 MUC22E2RYF6 1773 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-236ENST00000498808 NUMA1Q14980 2115 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 ZNF462Q96JM2 2506 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 TLR5O60602 858 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 PRPF6O94906 941 aaKnown RBP16.52■□□□□ 0.24
HDAC6-236ENST00000498808 TBX18O95935 607 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 STARD3Q14849 445 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 PAQR9Q6ZVX9 377 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 FAM35AQ86V20 835 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 WDR49Q8IV35 697 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 KLF16Q9BXK1 252 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-236ENST00000498808 NACA2Q9H009 215 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 PRORYQ9H606 182 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
HDAC6-236ENST00000498808 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 A8MXQ7 604 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 TNFSF14O43557 240 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 IGLV3-19P01714 112 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 FAM163BP0C2L3 166 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 IL12RB1P42701 662 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 CSNK1EP49674 416 aaKnown RBP16.51■□□□□ 0.23
HDAC6-236ENST00000498808 ALCAMQ13740 583 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 ENPP2Q13822 863 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 SURF1Q15526 300 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 KIF19Q2TAC6 998 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 WDR72Q3MJ13 1102 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 CCDC157Q569K6 752 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 DHRS13Q6UX07 377 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 TMPRSS6Q8IU80 811 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 BHMTQ93088 406 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 KIF2CQ99661 725 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 PLK2Q9NYY3 685 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 STK17AQ9UEE5 414 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 FBXO10Q9UK96 956 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 SNX11Q9Y5W9 270 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 CKAP5Q14008 2032 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 MYH10P35580 1976 aa16.51■□□□□ 0.23
HDAC6-236ENST00000498808 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 E9PAM4 449 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 PLK4O00444 970 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
HDAC6-236ENST00000498808 OXTRP30559 389 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 SUZ12Q15022 739 aaKnown RBP16.5■□□□□ 0.23
HDAC6-236ENST00000498808 CACUL1Q86Y37 369 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 ZNF843Q8N446 348 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 SIPA1Q96FS4 1042 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 DMAP1Q9NPF5 467 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-236ENST00000498808 THAP10Q9P2Z0 257 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-236ENST00000498808 CFAP46Q8IYW2 2715 aa16.5■□□□□ 0.23
HDAC6-236ENST00000498808 H3BQV1 296 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 TLX3O43711 291 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-236ENST00000498808 BMP15O95972 392 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 HLA-EP13747 358 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 IDEP14735 1019 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 ACO1P21399 889 aaKnown RBP16.49■□□□□ 0.23
HDAC6-236ENST00000498808 GRK6P43250 576 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 COPAP53621 1224 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 TNNC1P63316 161 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 ZMIZ2Q8NF64 920 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.49■□□□□ 0.232e-7■■■■■ 33.6
HDAC6-236ENST00000498808 COMMD8Q9NX08 183 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 LSM7Q9UK45 103 aaKnown RBP16.49■□□□□ 0.23
HDAC6-236ENST00000498808 RAI2Q9Y5P3 530 aa16.49■□□□□ 0.23
HDAC6-236ENST00000498808 ATP8B3O60423 1300 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 KCNK3O14649 394 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 DLATP10515 647 aaKnown RBP16.48■□□□□ 0.23
HDAC6-236ENST00000498808 EIF2S3P41091 472 aaKnown RBP16.48■□□□□ 0.23
HDAC6-236ENST00000498808 AFF3P51826 1226 aaKnown RBP16.48■□□□□ 0.23
HDAC6-236ENST00000498808 ZNF132P52740 706 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 MFAP3P55082 362 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 CLDN6P56747 220 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
HDAC6-236ENST00000498808 GEN1Q17RS7 908 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 LAYNQ6UX15 382 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 Q6ZNB5 142 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 SV2BQ7L1I2 683 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 ZNF605Q86T29 641 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 LSM14AQ8ND56 463 aaKnown RBP16.48■□□□□ 0.23
HDAC6-236ENST00000498808 SNX19Q92543 992 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 PRCCQ92733 491 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-236ENST00000498808 SMARCD1Q96GM5 515 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 SMOQ99835 787 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 MED10Q9BTT4 135 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 NUP58Q9BVL2 599 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 XYLT2Q9H1B5 865 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 CYLDQ9NQC7 956 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 KRT82Q9NSB4 513 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 OSER1Q9NX31 292 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 HSPBP1Q9NZL4 362 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 NXF1Q9UBU9 619 aaKnown RBP16.48■□□□□ 0.23
HDAC6-236ENST00000498808 SLC27A6Q9Y2P4 619 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 NAV2Q8IVL1 2488 aa16.48■□□□□ 0.23
HDAC6-236ENST00000498808 TENM4Q6N022 2769 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 PCDHGA12O60330 932 aa16.47■□□□□ 0.23
HDAC6-236ENST00000498808 AP1G2O75843 785 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms