RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MARCH2Q9P0N8 246 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 CFAP97Q9P2B7 532 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 TBC1D14Q9P2M4 693 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 TJP2Q9UDY2 1190 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 RASAL2Q9UJF2 1139 aa11.33□□□□□ -0.6
ATG4B-219ENST00000479941 LSM7Q9UK45 103 aaKnown RBP11.33□□□□□ -0.6
ATG4B-219ENST00000479941 BZW2Q9Y6E2 419 aaKnown RBP11.33□□□□□ -0.6
ATG4B-219ENST00000479941 F5P12259 2224 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 M0R296 226 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 MDM4O15151 490 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 GPR37L1O60883 481 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 HSF2BPO75031 334 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 ERBB2P04626 1255 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 FYNP06241 537 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 TPM1P09493 284 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 NCAM1P13591 858 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 GLULP15104 373 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 TNFAIP3P21580 790 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 MMP8P22894 467 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 CASP14P31944 242 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 SCNN1AP37088 669 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
ATG4B-219ENST00000479941 KPNA1P52294 538 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-219ENST00000479941 CENPCQ03188 943 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 KLHL30Q0D2K2 578 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 RUNX3Q13761 415 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 MLF2Q15773 248 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-219ENST00000479941 CLEC16AQ2KHT3 1053 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 EML3Q32P44 896 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 ITPRIPL2Q3MIP1 535 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 NAA35Q5VZE5 725 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 MSANTD2Q6P1R3 559 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 C1orf228Q6PIY5 440 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 OLFML1Q6UWY5 402 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 FAM183BPQ6ZVS7 135 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 HTR3DQ70Z44 454 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 SLC26A9Q7LBE3 791 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 BMP8AQ7Z5Y6 402 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 SIX5Q8N196 739 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 ATP2A3Q93084 1043 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 MSANTD3Q96H12 275 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 PCDHB18PQ96TA0 734 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 SYT11Q9BT88 431 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-219ENST00000479941 HEBP1Q9NRV9 189 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 SEPT11Q9NVA2 429 aaKnown RBP11.32□□□□□ -0.6
ATG4B-219ENST00000479941 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 ZNF510Q9Y2H8 683 aa11.32□□□□□ -0.6
ATG4B-219ENST00000479941 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
ATG4B-219ENST00000479941 HELZP42694 1942 aaKnown RBP11.31□□□□□ -0.6
ATG4B-219ENST00000479941 ZDBF2Q9HCK1 2354 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 SLC12A8A0AV02 714 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 KRBA1A5PL33 1030 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 PRR33A8MZF0 331 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 MAN2B1O00754 1011 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 AP5Z1O43299 807 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 GREM1O60565 184 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 NFATC1O95644 943 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 IRF1P10914 325 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 STARD6P59095 220 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 AMPD2Q01433 879 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 NR1H3Q13133 447 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 E4F1Q66K89 784 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-219ENST00000479941 TRIM68Q6AZZ1 485 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 XYLT1Q86Y38 959 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 PHF13Q86YI8 300 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-219ENST00000479941 ADGRG2Q8IZP9 1017 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 CPA6Q8N4T0 437 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 PLD4Q96BZ4 506 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 PIWIL1Q96J94 861 aaKnown RBP11.31□□□□□ -0.6
ATG4B-219ENST00000479941 SERPINB11Q96P15 392 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 SLC2A13Q96QE2 648 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 LINC00597Q9H2U6 94 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 MFSD1Q9H3U5 465 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 EBF3Q9H4W6 596 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 ECT2Q9H8V3 914 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 HPS4Q9NQG7 708 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 GTSE1Q9NYZ3 720 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 WDR35Q9P2L0 1181 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 SFMBT1Q9UHJ3 866 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 NAALADL1Q9UQQ1 740 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 WNT6Q9Y6F9 365 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 PIAS3Q9Y6X2 628 aa11.31□□□□□ -0.6
ATG4B-219ENST00000479941 KIF26AQ9ULI4 1882 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 STC2O76061 302 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 SERPING1P05155 500 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 CALB1P05937 261 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 GZMAP12544 262 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 SKILP12757 684 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 HNRNPH3P31942 346 aaKnown RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 HARS2P49590 506 aaKnown RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 CDK17Q00537 523 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 C1QBPQ07021 282 aaKnown RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 TNK2Q07912 1038 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 NNTQ13423 1086 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 ARID5BQ14865 1188 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 TAF5Q15542 800 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms