RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 AMPD1P23109 780 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 PAX3P23760 479 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 KDSRQ06136 332 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 MTA1Q13330 715 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 ANKRD52Q8NB46 1076 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 TSPAN18Q96SJ8 248 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 CDK5RAP1Q96SZ6 601 aaKnown RBP14.24□□□□□ -0.13
BRAT1-203ENST00000467558 ULBP1Q9BZM6 244 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 ADA2Q9NZK5 511 aa14.24□□□□□ -0.13
BRAT1-203ENST00000467558 ZNF197O14709 1029 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 PQBP1O60828 265 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 HIST1H2AGP0C0S8 130 aaPredicted RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 HIST1H2ADP20671 130 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 CHI3L2Q15782 390 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 ARHGAP15Q53QZ3 475 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 HIST1H2AHQ96KK5 128 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 YME1L1Q96TA2 773 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 HIST1H2AJQ99878 128 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 H2AFJQ9BTM1 129 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 LATS2Q9NRM7 1088 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 AFF4Q9UHB7 1163 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 NAALADL1Q9UQQ1 740 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 PKP3Q9Y446 797 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 TBKBP1A7MCY6 615 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 LCA5LO95447 670 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 NPR3P17342 541 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 PGM1P36871 562 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 RGS4P49798 205 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 DRG2P55039 364 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 ARHGEF7Q14155 803 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 TBCCQ15814 346 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 POLNQ7Z5Q5 900 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 UNC45BQ8IWX7 931 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 AGGF1Q8N302 714 aaeCLIP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 MSL3Q8N5Y2 521 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 WNT8BQ93098 351 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 OLA1Q9NTK5 396 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 RNF19AQ9NV58 838 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 DCDC2Q9UHG0 476 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 C5P01031 1676 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 HACD1B0YJ81 288 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 KLHL2O95198 593 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 TNFRSF8P28908 595 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 ELK3P41970 407 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 HSP90AA5PQ58FG0 334 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 SIAH1Q8IUQ4 282 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 RBM22Q9NW64 420 aaKnown RBP eCLIP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 TSR3Q9UJK0 312 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 DRG1Q9Y295 367 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 LTBP3Q9NS15 1303 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 MAGEB16A2A368 324 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 MMP3P08254 477 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 BDNFP23560 247 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 AARSP49588 968 aaKnown RBP eCLIP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 SPIRE1Q08AE8 756 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 ZNF844Q08AG5 666 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 KRT80Q6KB66 452 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 KCNT2Q6UVM3 1135 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 PRELID2Q8N945 189 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 BLOC1S5Q8TDH9 187 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 APBB2Q92870 758 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 APOL2Q9BQE5 337 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 LRRC19Q9H756 370 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 DERAQ9Y315 318 aa14.23□□□□□ -0.13
BRAT1-203ENST00000467558 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.23□□□□□ -0.13
BRAT1-203ENST00000467558 C2orf81A6NN90 581 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 CFAP99D6REC4 459 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 SASH3O75995 380 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 OXCT1P55809 520 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 TBX4P57082 545 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 AP2B1P63010 937 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 TEDDM1Q5T9Z0 273 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 PTRHD1Q6GMV3 140 aaKnown RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 AADACL2Q6P093 401 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 ARID3BQ8IVW6 561 aaPredicted RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 PARP9Q8IXQ6 854 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 B3GALNT2Q8NCR0 500 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 PPP1R13LQ8WUF5 828 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 SNX19Q92543 992 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 MAGEB18Q96M61 343 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 XPNPEP1Q9NQW7 623 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 SCOCQ9UIL1 159 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 TRHDEQ9UKU6 1024 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 MAP2K7O14733 419 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 ENO1P06733 434 aaKnown RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 DARSP14868 501 aaKnown RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 YWHAQP27348 245 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 HDAC4P56524 1084 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 RPL7AP62424 266 aaKnown RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 MGAT5Q09328 741 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 CUL3Q13618 768 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 HIC1Q14526 733 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 C15orf59Q2T9L4 293 aaPredicted RBP14.22□□□□□ -0.13
BRAT1-203ENST00000467558 SH3D19Q5HYK7 790 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 SPRYD7Q5W111 196 aa14.22□□□□□ -0.13
BRAT1-203ENST00000467558 DDX53Q86TM3 631 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms