RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CDH22Q9UJ99 828 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 LRP6O75581 1613 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 COL16A1Q07092 1604 aaPredicted RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 C1orf232A0A0U1RR37 186 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 TMEM253P0C7T8 217 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 KRT10P13645 584 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 GCAP28676 217 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 PHKA1P46020 1223 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 SLC9A3P48764 834 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 GALK2Q01415 458 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 DSC3Q14574 896 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 FAM205BPQ63HN1 556 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 FAM171BQ6P995 826 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 CCDC33Q8N5R6 958 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 KIAA0895Q8NCT3 520 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 IL17REQ8NFR9 667 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 ALG3Q92685 438 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 REXO5Q96IC2 774 aaKnown RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 OSBPL11Q9BXB4 747 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 FOXP3Q9BZS1 431 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 TRIM9Q9C026 710 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 LRRC19Q9H756 370 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 SMYD3Q9H7B4 428 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 HMG20AQ9NP66 347 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 GIMAP4Q9NUV9 329 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 RIMS3Q9UJD0 308 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 NUP50Q9UKX7 468 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 EIF3LQ9Y262 564 aaKnown RBP11.1□□□□□ -0.63
LINC00342-202ENST00000448494 MAU2Q9Y6X3 613 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
LINC00342-202ENST00000448494 SLC9A3R1O14745 358 aaPredicted RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SPAG6O75602 509 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 IFIT1P09914 478 aaKnown RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 FCER1AP12319 257 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 CDH1P12830 882 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 KCNA6P17658 529 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ADRA1DP25100 572 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SRP54P61011 504 aaKnown RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 RAD51Q06609 339 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 GRSF1Q12849 480 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 NFATC3Q12968 1075 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 IDI1Q13907 227 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SNX17Q15036 470 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 CLEC16AQ2KHT3 1053 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 INAVAQ3KP66 663 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 FAM47CQ5HY64 1035 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SEL1L2Q5TEA6 688 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ZCCHC8Q6NZY4 707 aaKnown RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 LINC00299Q6ZSB3 139 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 CPNE9Q8IYJ1 553 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 GUF1Q8N442 669 aaKnown RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 FAM109AQ8N4B1 249 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ALKBH8Q96BT7 664 aaKnown RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 TSG101Q99816 390 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 EMILIN2Q9BXX0 1053 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ANLNQ9NQW6 1124 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 OLAHQ9NV23 265 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 TXNDC16Q9P2K2 825 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 PTPN22Q9Y2R2 807 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 AP3M1Q9Y2T2 418 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 TESMINQ9Y4I5 508 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 PEAK1Q9H792 1746 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 KIF13BQ9NQT8 1826 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 USP6P35125 1406 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 TMX2-CTNND1H3BSU7 103 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ACSL4O60488 711 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 MAP3K6O95382 1288 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SERPINB1P30740 379 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 MAN1A1P33908 653 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 GRIK1P39086 918 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 PPP4CP60510 307 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 ASIC1P78348 528 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 AMPD3Q01432 767 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 CETN1Q12798 172 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 NFE2L1Q14494 772 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 MAPRE1Q15691 268 aaKnown RBP11.09□□□□□ -0.63
LINC00342-202ENST00000448494 UBE2UQ5VVX9 321 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 UGT3A1Q6NUS8 523 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SIX6OS1Q8N1H7 587 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 FBXW8Q8N3Y1 598 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 TTLQ8NG68 377 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SLC35G2Q8TBE7 412 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 UROC1Q96N76 676 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 FERD3LQ96RJ6 166 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 LIN7BQ9HAP6 207 aa11.09□□□□□ -0.63
LINC00342-202ENST00000448494 SLC24A2Q9UI40 661 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms