RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 FMR1NBQ8N0W7 255 aaPredicted RBP22.14■■□□□ 1.13
VSX1-206ENST00000444511 RLN3Q8WXF3 142 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 TMEM176AQ96HP8 235 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 SPTBN2O15020 2390 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 CACNG3O60359 315 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 BYSLQ13895 437 aaKnown RBP22.13■■□□□ 1.13
VSX1-206ENST00000444511 ZNF658Q5TYW1 1059 aaPredicted RBP22.13■■□□□ 1.13
VSX1-206ENST00000444511 LPCAT2Q7L5N7 544 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 SCD5Q86SK9 330 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 MIB1Q86YT6 1006 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 CNTNAP3BQ96NU0 1288 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 GSDMAQ96QA5 445 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 CDK5RAP1Q96SZ6 601 aaKnown RBP22.13■■□□□ 1.13
VSX1-206ENST00000444511 ARID3AQ99856 593 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 CNTNAP3Q9BZ76 1288 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 CLIC5Q9NZA1 410 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 MARK1Q9P0L2 795 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 USP3Q9Y6I4 520 aa22.13■■□□□ 1.13
VSX1-206ENST00000444511 TM4SF5O14894 197 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 KHNYNO15037 678 aaKnown RBP22.12■■□□□ 1.13
VSX1-206ENST00000444511 SLC16A3O15427 465 aaKnown RBP22.12■■□□□ 1.13
VSX1-206ENST00000444511 SMC2O95347 1197 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 RAD23BP54727 409 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 SLC8A3P57103 927 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 ZNF276Q8N554 614 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 SLC4A11Q8NBS3 891 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 TATDN2Q93075 761 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 FAM124BQ9H5Z6 455 aaPredicted RBP22.12■■□□□ 1.13
VSX1-206ENST00000444511 STARD13Q9Y3M8 1113 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 MYH10P35580 1976 aa22.12■■□□□ 1.13
VSX1-206ENST00000444511 MYOFQ9NZM1 2061 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 HOXB2P14652 356 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 NTSR1P30989 418 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 WASP42768 502 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 FKBP3Q00688 224 aaKnown RBP22.11■■□□□ 1.13
VSX1-206ENST00000444511 BECN1Q14457 450 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 CBWD6Q4V339 395 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 COBLL1Q53SF7 1204 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 CBWD3Q5JTY5 395 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 CBWD5Q5RIA9 395 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 ARHGAP17Q68EM7 881 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 SDE2Q6IQ49 451 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 Q6ZNB5 142 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 PIGKQ92643 395 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 BHMTQ93088 406 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 SMARCE1Q969G3 411 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 RASAL2Q9UJF2 1139 aa22.11■■□□□ 1.13
VSX1-206ENST00000444511 LNP1A1A4G5 178 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 ZBTB24O43167 697 aaPredicted RBP22.1■■□□□ 1.13
VSX1-206ENST00000444511 STC2O76061 302 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 DGKGP49619 791 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 COG7P83436 770 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 EFEMP1Q12805 493 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 EGFLAMQ63HQ2 1017 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 ANKRD40Q6AI12 368 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 PIGZQ86VD9 579 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 CHPFQ8IZ52 775 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 ARHGAP18Q8N392 663 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 FRMD1Q8N878 549 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 ANKRD52Q8NB46 1076 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 LSM14BQ9BX40 385 aaKnown RBP22.1■■□□□ 1.13
VSX1-206ENST00000444511 GTPBP4Q9BZE4 634 aaKnown RBP22.1■■□□□ 1.13
VSX1-206ENST00000444511 UBXN6Q9BZV1 441 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 HOOK1Q9UJC3 728 aaKnown RBP22.1■■□□□ 1.13
VSX1-206ENST00000444511 ZNF510Q9Y2H8 683 aa22.1■■□□□ 1.13
VSX1-206ENST00000444511 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 MAP7D1Q3KQU3 841 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 TOGARAM2Q6ZUX3 1019 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 RSRC2Q7L4I2 434 aaKnown RBP22.09■■□□□ 1.13
VSX1-206ENST00000444511 ARMCX6Q7L4S7 300 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 TMEFF1Q8IYR6 380 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 ERCC4Q92889 916 aaPredicted RBP22.09■■□□□ 1.13
VSX1-206ENST00000444511 DCLK3Q9C098 648 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 PLK2Q9NYY3 685 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 ARMCX3Q9UH62 379 aaPredicted RBP22.09■■□□□ 1.13
VSX1-206ENST00000444511 MBD1Q9UIS9 605 aaPredicted RBP22.09■■□□□ 1.13
VSX1-206ENST00000444511 HCN2Q9UL51 889 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 COQ4Q9Y3A0 265 aa22.09■■□□□ 1.13
VSX1-206ENST00000444511 C4orf47A7E2U8 309 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 PATE3B3GLJ2 98 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 PRRT4C9JH25 899 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 HMBSP08397 361 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 GABRG2P18507 467 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 PMS1P54277 932 aaKnown RBP22.08■■□□□ 1.13
VSX1-206ENST00000444511 YWHAEP62258 255 aaKnown RBP22.08■■□□□ 1.13
VSX1-206ENST00000444511 NUCB2P80303 420 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 LRRC63Q05C16 580 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 CUL2Q13617 745 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 GOLGA7BQ2TAP0 167 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 RAB41Q5JT25 222 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 DAB2IPQ5VWQ8 1189 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 ZC3H3Q8IXZ2 948 aaKnown RBP22.08■■□□□ 1.13
VSX1-206ENST00000444511 ENGASEQ8NFI3 743 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 ACOX2Q99424 681 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 STRIP2Q9ULQ0 834 aa22.08■■□□□ 1.13
VSX1-206ENST00000444511 A0A1W2PQF6 199 aa22.07■■□□□ 1.12
VSX1-206ENST00000444511 TRIM49BA6NDI0 452 aa22.07■■□□□ 1.12
VSX1-206ENST00000444511 KLKB1P03952 638 aa22.07■■□□□ 1.12
VSX1-206ENST00000444511 CORO1AP31146 461 aaKnown RBP22.07■■□□□ 1.12
VSX1-206ENST00000444511 CHKAP35790 457 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms