RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
HSPG2-206ENST00000439717 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 BAP1Q92560 729 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 EDEM1Q92611 657 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 IQCDQ96DY2 449 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 CPXM1Q96SM3 734 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 LINC00597Q9H2U6 94 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 ECT2Q9H8V3 914 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 ASNSD1Q9NWL6 643 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 MARCH2Q9P0N8 246 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 IFNKQ9P0W0 207 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 RASAL2Q9UJF2 1139 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 NOCTQ9UK39 431 aaKnown RBP12.37□□□□□ -0.43
HSPG2-206ENST00000439717 LSM7Q9UK45 103 aaKnown RBP12.37□□□□□ -0.43
HSPG2-206ENST00000439717 SIT1Q9Y3P8 196 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 SHISA7A6NL88 538 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 MDM4O15151 490 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 NCAM2O15394 837 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 GREM1O60565 184 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 MMEP08473 750 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 IRF1P10914 325 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 ARSAP15289 507 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 AVPR2P30518 371 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 CTHP32929 405 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 NUBP1P53384 320 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 MIB1Q86YT6 1006 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 ADGRG2Q8IZP9 1017 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 PJA1Q8NG27 643 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 FAM3CQ92520 227 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 DCLK3Q9C098 648 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 TTYH3Q9C0H2 523 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 SYNCQ9H7C4 482 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 ZNF510Q9Y2H8 683 aa12.36□□□□□ -0.43
HSPG2-206ENST00000439717 HBS1LQ9Y450 684 aaKnown RBP12.36□□□□□ -0.43
HSPG2-206ENST00000439717 TICRRQ7Z2Z1 1910 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 A0A1W2PQJ5 194 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 SLC12A8A0AV02 714 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 OTOL1A6NHN0 477 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-206ENST00000439717 FAM170BA6NMN3 283 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 STC2O76061 302 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 ERBB2P04626 1255 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 CYP1A1P04798 512 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-206ENST00000439717 NCAM1P13591 858 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 CHRNB2P17787 502 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 GJA4P35212 333 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 MAGEA9P43362 315 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 GABRB2P47870 512 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 YWHAZP63104 245 aaKnown RBP12.35□□□□□ -0.43
HSPG2-206ENST00000439717 NOMO3P69849 1222 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 FMO1Q01740 532 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 ARID5AQ03989 594 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 UBXN2BQ14CS0 331 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 TRIP4Q15650 581 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-206ENST00000439717 PTPN20Q4JDL3 420 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 TOGARAM2Q6ZUX3 1019 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 ERICH1Q86X53 443 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 ZNF687Q8N1G0 1237 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 TTC8Q8TAM2 541 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 SLC20A1Q8WUM9 679 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 WBP2Q969T9 261 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 FAM149B1Q96BN6 582 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 C18orf8Q96DM3 657 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 FOXQ1Q9C009 403 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 NUCKS1Q9H1E3 243 aaKnown RBP12.35□□□□□ -0.43
HSPG2-206ENST00000439717 POPDC2Q9HBU9 364 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 AIPL1Q9NZN9 384 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 TJP2Q9UDY2 1190 aa12.35□□□□□ -0.43
HSPG2-206ENST00000439717 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 TRDMT1O14717 391 aaKnown RBP12.34□□□□□ -0.43
HSPG2-206ENST00000439717 CAPN9O14815 690 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 HSF2BPO75031 334 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 ADH1CP00326 375 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 CYP17A1P05093 508 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 FYNP06241 537 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 CD72P21854 359 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 TARSP26639 723 aaKnown RBP12.34□□□□□ -0.43
HSPG2-206ENST00000439717 SCNN1AP37088 669 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 SOX9P48436 509 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 VCPP55072 806 aaKnown RBP12.34□□□□□ -0.43
HSPG2-206ENST00000439717 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 NNTQ13423 1086 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 DHCR24Q15392 516 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 ASIC2Q16515 512 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 OR6B2Q6IFH4 312 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 OLFML1Q6UWY5 402 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 Q6ZNB5 142 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 IRF2BP2Q7Z5L9 587 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 CCDC105Q8IYK2 499 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 TMEM105Q8N8V8 129 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 ZNF397Q8NF99 534 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-206ENST00000439717 CLDN23Q96B33 292 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms