RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ZMAT2Q96NC0 199 aaKnown RBP18.76■□□□□ 0.59
CD40-201ENST00000372276 C10orf88Q9H8K7 445 aa18.76■□□□□ 0.59
CD40-201ENST00000372276 KBTBD13C9JR72 458 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 C2CD2LO14523 706 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 LPXNO60711 386 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 KRT38O76015 456 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 ATP6V1G2O95670 118 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 ITGBL1O95965 494 aaPredicted RBP18.75■□□□□ 0.59
CD40-201ENST00000372276 SNRPAP09012 282 aaKnown RBP18.75■□□□□ 0.59
CD40-201ENST00000372276 SMIM10L2AP0DMW4 78 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 SMIM10L2BP0DMW5 78 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 MLNP12872 115 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 CNTFP26441 200 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 RBL1P28749 1068 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 L1CAMP32004 1257 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 ARL4AP40617 200 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 PARP6Q2NL67 630 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 FAM47EQ6ZV65 393 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 TBC1D1Q86TI0 1168 aaPredicted RBP18.75■□□□□ 0.59
CD40-201ENST00000372276 AGGF1Q8N302 714 aaeCLIP18.75■□□□□ 0.59
CD40-201ENST00000372276 SMC1BQ8NDV3 1235 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 TCP10LQ8TDR4 215 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 TMEM237Q96Q45 408 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 WDR83Q9BRX9 315 aaKnown RBP18.75■□□□□ 0.59
CD40-201ENST00000372276 SAR1AQ9NR31 198 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 MKS1Q9NXB0 559 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 ZC3H7BQ9UGR2 993 aaKnown RBP18.75■□□□□ 0.59
CD40-201ENST00000372276 Q9Y3F1 56 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 HEY1Q9Y5J3 304 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 PDCD11Q14690 1871 aaKnown RBP18.75■□□□□ 0.59
CD40-201ENST00000372276 SCN1AP35498 2009 aa18.75■□□□□ 0.59
CD40-201ENST00000372276 SF3B1O75533 1304 aaKnown RBP eCLIP18.75■□□□□ 0.59
CD40-201ENST00000372276 KLF11O14901 512 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 XPO1O14980 1071 aaKnown RBP18.74■□□□□ 0.59
CD40-201ENST00000372276 HUS1O60921 280 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 GRAP2O75791 330 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 RECQL4O94761 1208 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 GNAT1P11488 350 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 WARSP23381 471 aaKnown RBP18.74■□□□□ 0.59
CD40-201ENST00000372276 CCDC91Q7Z6B0 441 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 BRI3BPQ8WY22 251 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 QKIQ96PU8 341 aaKnown RBP eCLIP18.74■□□□□ 0.59
CD40-201ENST00000372276 KATNAL1Q9BW62 490 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 IQCGQ9H095 443 aaKnown RBP18.74■□□□□ 0.59
CD40-201ENST00000372276 MANSC1Q9H8J5 431 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 KIF9Q9HAQ2 790 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 FAM49BQ9NUQ9 324 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 RPL26L1Q9UNX3 145 aaKnown RBP18.74■□□□□ 0.59
CD40-201ENST00000372276 TRIP11Q15643 1979 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 BANF1O75531 89 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 DHRS4L1P0CG22 281 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 MATKP42679 507 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 PSMC4P43686 418 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 AIF1P55008 147 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 YWHAZP63104 245 aaKnown RBP18.74■□□□□ 0.59
CD40-201ENST00000372276 GAD2Q05329 585 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 DBN1Q16643 649 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 RAB3IL1Q8TBN0 382 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 RMDN2Q96LZ7 410 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 EIF2AQ9BY44 585 aaKnown RBP18.74■□□□□ 0.59
CD40-201ENST00000372276 TRIM55Q9BYV6 548 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 FAM49AQ9H0Q0 323 aaPredicted RBP18.74■□□□□ 0.59
CD40-201ENST00000372276 NOD2Q9HC29 1040 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 TUBGCP4Q9UGJ1 667 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 AP4E1Q9UPM8 1137 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
CD40-201ENST00000372276 SMIM28A0A1B0GU29 152 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 WFS1O76024 890 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 MAGEA3P43357 314 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 CPT1AP50416 773 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 NEK3P51956 506 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 CRYBB1P53674 252 aaPredicted RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 NAB1Q13506 487 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 MFSD10Q14728 455 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 SLC25A52Q3SY17 297 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 KBTBD12Q3ZCT8 623 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 WLSQ5T9L3 541 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 HEATR6Q6AI08 1181 aaKnown RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 C7orf31Q8N865 590 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 C10orf82Q8WW14 230 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 MRRFQ96E11 262 aaKnown RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 PIWIL1Q96J94 861 aaKnown RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 HNRNPABQ99729 332 aaKnown RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 NAT9Q9BTE0 207 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 DHX35Q9H5Z1 703 aaKnown RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 ETNK1Q9HBU6 452 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 EIF2B3Q9NR50 452 aaKnown RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 MTO1Q9Y2Z2 717 aaKnown RBP18.73■□□□□ 0.59
CD40-201ENST00000372276 RAD54BQ9Y620 910 aa18.73■□□□□ 0.59
CD40-201ENST00000372276 IGF2BP3O00425 579 aaKnown RBP eCLIP18.72■□□□□ 0.59
CD40-201ENST00000372276 DYNC1LI2O43237 492 aaPredicted RBP18.72■□□□□ 0.59
CD40-201ENST00000372276 APOEP02649 317 aa18.72■□□□□ 0.59
CD40-201ENST00000372276 ATP5BP06576 529 aaKnown RBP18.72■□□□□ 0.59
CD40-201ENST00000372276 CDK18Q07002 472 aa18.72■□□□□ 0.59
CD40-201ENST00000372276 SEMA5AQ13591 1074 aa18.72■□□□□ 0.59
CD40-201ENST00000372276 PREPLQ4J6C6 727 aaPredicted RBP18.72■□□□□ 0.59
CD40-201ENST00000372276 PPP6R3Q5H9R7 873 aaPredicted RBP18.72■□□□□ 0.59
CD40-201ENST00000372276 PDZD4Q76G19 769 aaPredicted RBP18.72■□□□□ 0.59
CD40-201ENST00000372276 OTOAQ7RTW8 1153 aa18.72■□□□□ 0.59
CD40-201ENST00000372276 GSDMBQ8TAX9 411 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms