RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 MTA3Q9BTC8 594 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 CCDC113Q9H0I3 377 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 ERVMER34-1Q9H9K5 563 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 PTPRHQ9HD43 1115 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 EVA1BQ9NVM1 165 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 RBM28Q9NW13 759 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 SMPD4Q9NXE4 827 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 RGL1Q9NZL6 768 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 PCDHGA7Q9Y5G6 932 aa9.59□□□□□ -0.87
UBE2D3-205ENST00000350435 CCDC187A0A096LP49 1063 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 A0A1W2PPC4 97 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 EDIL3O43854 480 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 LRPAP1P30533 357 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 SLC6A4P31645 630 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 PDE1AP54750 535 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 EPHA7Q15375 998 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 DDR2Q16832 855 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 ZNF568Q3ZCX4 644 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 LACTB2Q53H82 288 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 METTL23Q86XA0 190 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 MB21D2Q8IYB1 491 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 TEX19Q8NA77 164 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 DEPTORQ8TB45 409 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 DYDC2Q96IM9 177 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 SENP8Q96LD8 212 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 ORAI3Q9BRQ5 295 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 SPHK2Q9NRA0 654 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 ACSL6Q9UKU0 697 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 PCDHB11Q9Y5F2 797 aa9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 TDRD6O60522 2096 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-205ENST00000350435 ARHGEF17Q96PE2 2063 aaPredicted RBP9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 CCDC168Q8NDH2 2452 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 NPC1O15118 1278 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 PRC1O43663 620 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 USO1O60763 962 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 SDC3O75056 442 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 TDP2O95551 362 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 LDLRP01130 860 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 WT1P19544 449 aaPredicted RBP9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 COPAP53621 1224 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 NXPH1P58417 271 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 SAFBQ15424 915 aaKnown RBP eCLIP9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 SLC45A4Q5BKX6 768 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 NT5DC1Q5TFE4 455 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 SYNE3Q6ZMZ3 975 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 RBM44Q6ZP01 1051 aaKnown RBP9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 LRRTM3Q86VH5 581 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 TPH2Q8IWU9 490 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 OR4C6Q8NH72 309 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 TRIM9Q9C026 710 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 CDT1Q9H211 546 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 LHX5Q9H2C1 402 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 ANKEF1Q9NU02 776 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 TRPM5Q9NZQ8 1165 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 VAV3Q9UKW4 847 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 DSEQ9UL01 958 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 TNFSF13BQ9Y275 285 aa9.57□□□□□ -0.88
UBE2D3-205ENST00000350435 CYP3A7-CYP3A51PA0A087WV96 503 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 PRR19A6NJB7 356 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 TLR4O00206 839 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 NADKO95544 446 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 IGHV4-34P06331 123 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 RARGP13631 454 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 TGM2P21980 687 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 CYP3A7P24462 503 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 LIFRP42702 1097 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 DGKGP49619 791 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 CDH8P55286 799 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 PFKFB3Q16875 520 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 EIF2S3LQ2VIR3 472 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 KIAA0895LQ68EN5 471 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 NCAPH2Q6IBW4 605 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 TMEM25Q86YD3 366 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 TMEM130Q8N3G9 435 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 TBCKQ8TEA7 893 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 ARRDC3Q96B67 414 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 RNF38Q9H0F5 515 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 SGK2Q9HBY8 427 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 ENTPD4Q9Y227 616 aa9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.56□□□□□ -0.88
UBE2D3-205ENST00000350435 TACC2O95359 2948 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 A0A1W2PR77 199 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 NEDD8-MDP1E9PL57 170 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 CYP11A1P05108 521 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 ALPPL2P10696 532 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 MBL2P11226 248 aaPredicted RBP9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 PAX3P23760 479 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 NAMPTP43490 491 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 TRAPPC10P48553 1259 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 RARRES1P49788 294 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 EFNA5P52803 228 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 NLRP5P59047 1200 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 LILRA4P59901 499 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 MYL7Q01449 175 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 TESK1Q15569 626 aa9.55□□□□□ -0.88
UBE2D3-205ENST00000350435 NFE2Q16621 373 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms