RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SYCE2Q6PIF2 218 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ZDHHC24Q6UX98 284 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 RRAGAQ7L523 313 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 RALYLQ86SE5 291 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 HERC6Q8IVU3 1022 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SIX6OS1Q8N1H7 587 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 OR5H6Q8NGV6 325 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 TEX47Q8TBZ9 253 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 C7orf43Q8WVR3 580 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SH3KBP1Q96B97 665 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 RMND5BQ96G75 393 aaPredicted RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 HES6Q96HZ4 224 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 GAL3ST1Q99999 423 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 GCOM2Q9BZD3 368 aaPredicted RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 WNT8AQ9H1J5 351 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 RPF2Q9H7B2 306 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 SLCO1B3Q9NPD5 702 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ANLNQ9NQW6 1124 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 CYP26B1Q9NR63 512 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PAQR5Q9NXK6 330 aaPredicted RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 ZNF229Q9UJW7 825 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SNX8Q9Y5X2 465 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PXDNLA1KZ92 1463 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ITSN1Q15811 1721 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 A0A0G2JND7 137 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 RAD51BO15315 384 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PRPF4O43172 522 aaKnown RBP eCLIP8.89□□□□□ -0.99
TDP1-201ENST00000335725 BMP15O95972 392 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ATP5BP06576 529 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 HK2P52789 917 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 CDC20Q12834 499 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 TSC22D1Q15714 1073 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 EXOC3L4Q17RC7 722 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 TBRG1Q3YBR2 411 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PLEKHG7Q6ZR37 379 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 FKBP9P1Q75LS8 142 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 G2E3Q7L622 706 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 JAMLQ86YT9 394 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PM20D2Q8IYS1 436 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 LRRC71Q8N4P6 559 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 EPS8L1Q8TE68 723 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 TBC1D20Q96BZ9 403 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 AK8Q96MA6 479 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 RBM15Q96T37 977 aaKnown RBP eCLIP8.89□□□□□ -0.99
TDP1-201ENST00000335725 CHID1Q9BWS9 393 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ERVMER34-1Q9H9K5 563 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SLC35C2Q9NQQ7 365 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PNPLA3Q9NST1 481 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SYBUQ9NX95 663 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 TAGLN3Q9UI15 199 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ZNF221Q9UK13 617 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PTBP2Q9UKA9 531 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 ZMYM2Q9UBW7 1377 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ADGRB1O14514 1584 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 KDM3AQ9Y4C1 1321 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 KLF18A0A0U1RQI7 1052 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 LRRIQ4A6NIV6 560 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 SPAG6O75602 509 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 CLPXO76031 633 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 MFN2O95140 757 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 SERPING1P05155 500 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 HMOX1P09601 288 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 TGM1P22735 817 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 RPP38P78345 283 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 GSTO1P78417 241 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 MAPK7Q13164 816 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ESCO2Q56NI9 601 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 HDDC2Q7Z4H3 204 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 STX12Q86Y82 276 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 HPS6Q86YV9 775 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 RNF135Q8IUD6 432 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ADGRG5Q8IZF4 528 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 RBM15BQ8NDT2 890 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 SYN2Q92777 582 aaPredicted RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 GLG1Q92896 1179 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 SLC10A4Q96EP9 437 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ZNF512BQ96KM6 892 aaPredicted RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 MCMBPQ9BTE3 642 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 RPRD1BQ9NQG5 326 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 DCTN4Q9UJW0 460 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 HCN4Q9Y3Q4 1203 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ZNF532Q9HCE3 1301 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 CENPXA8MT69 81 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 TOR1AO14656 332 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 GAS2O43903 313 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 DAB1O75553 588 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 ITGA4P13612 1032 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 CYP3A5P20815 502 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 MAP4P27816 1152 aaKnown RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 SHMT1P34896 483 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 HPCAL1P37235 193 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 RCAN1P53805 252 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 GHRHRQ02643 423 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PFKFB3Q16875 520 aaPredicted RBP8.88□□□□□ -0.99
TDP1-201ENST00000335725 ARHGAP44Q17R89 818 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PERM1Q5SV97 790 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 LINC00299Q6ZSB3 139 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 PIK3AP1Q6ZUJ8 805 aa8.88□□□□□ -0.99
TDP1-201ENST00000335725 CYFIP1Q7L576 1253 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms