RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 DFNA5O60443 496 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 HLA-DRAP01903 254 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 PYGLP06737 847 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 PYGMP11217 842 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 KRT13P13646 458 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ATF6P18850 670 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 DRD1P21728 446 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 IRS1P35568 1242 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 DAOAP59103 153 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ZNF200P98182 395 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 SULT2A1Q06520 285 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 NCOA4Q13772 614 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 MAP7Q14244 749 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 PSMD5Q16401 504 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ZNF658BQ4V348 819 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 INO80DQ53TQ3 878 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 ACAD10Q6JQN1 1059 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 XKR5Q6UX68 686 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 TRIM69Q86WT6 500 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 DCP2Q8IU60 420 aaKnown RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 TMIEQ8NEW7 156 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ZSCAN18Q8TBC5 510 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 EPS8L1Q8TE68 723 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 EPAS1Q99814 870 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 FRMD8Q9BZ67 464 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 HOMER2Q9NSB8 354 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 SMOXQ9NWM0 555 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 TMEM63CQ9P1W3 806 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 SUN2Q9UH99 717 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 C3orf70A6NLC5 250 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 SLC38A8A6NNN8 435 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 AGAP14A8MT82 685 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 KCNJ18B7U540 433 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 SLC16A4O15374 487 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 URODP06132 367 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 NFICP08651 508 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 PNLIPP16233 465 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 PTPN1P18031 435 aaKnown RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 SDHBP21912 280 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 MAPK8P45983 427 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 WNT7BP56706 349 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 GEMIN4P57678 1058 aaKnown RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 YBEYP58557 167 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 HTRA3P83110 453 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ACVR1Q04771 509 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 KCNJ12Q14500 433 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ZSCAN23Q3MJ62 389 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 TRIM74Q86UV6 250 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 TRIM73Q86UV7 250 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 FAM35AQ86V20 835 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ADGRF2Q8IZF7 708 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 NUP93Q8N1F7 819 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ECHDC3Q96DC8 303 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 SENP8Q96LD8 212 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 CNOT6LQ96LI5 555 aaKnown RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 CDX2Q99626 313 aaPredicted RBP6.83□□□□□ -1.32
RTTN-215ENST00000639487 ZNF670Q9BS34 389 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 HDAC8Q9BY41 377 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ARNT2Q9HBZ2 717 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 ZDHHC4Q9NPG8 344 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 PRDM9Q9NQV7 894 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 RAD18Q9NS91 495 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 YIPF1Q9Y548 306 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 PCDHGA2Q9Y5H1 932 aa6.83□□□□□ -1.32
RTTN-215ENST00000639487 EIF3FO00303 357 aaPredicted RBP6.82□□□□□ -1.32
RTTN-215ENST00000639487 CCP110O43303 1012 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 TBX10O75333 385 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 VTNP04004 478 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 PRKCGP05129 697 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 L1CAMP32004 1257 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 NR2C2P49116 596 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 GYS2P54840 703 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 ROR1Q01973 937 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 SFSWAPQ12872 951 aaKnown RBP6.82□□□□□ -1.32
RTTN-215ENST00000639487 STK3Q13188 491 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 BYSLQ13895 437 aaKnown RBP6.82□□□□□ -1.32
RTTN-215ENST00000639487 PDK2Q15119 407 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 KRT31Q15323 416 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 METTL2BQ6P1Q9 378 aaKnown RBP6.82□□□□□ -1.32
RTTN-215ENST00000639487 CLEC20AQ6ZU45 233 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 FUKQ8N0W3 1084 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 ZBTB44Q8NCP5 570 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 ZSWIM2Q8NEG5 633 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 GOLGA1Q92805 767 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 TMEM143Q96AN5 459 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 CHFRQ96EP1 664 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 HPDLQ96IR7 371 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 FCRL2Q96LA5 508 aaPredicted RBP6.82□□□□□ -1.32
RTTN-215ENST00000639487 NT5C1BQ96P26 610 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 FOXP3Q9BZS1 431 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 NKX2-4Q9H2Z4 354 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 EPHX3Q9H6B9 360 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 SLC24A3Q9HC58 644 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 GJB4Q9NTQ9 266 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 FOXD4L1Q9NU39 408 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 PIN4Q9Y237 131 aaKnown RBP6.82□□□□□ -1.32
RTTN-215ENST00000639487 HS3ST2Q9Y278 367 aa6.82□□□□□ -1.32
RTTN-215ENST00000639487 BCLAF3A2AJT9 711 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms