RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 MYRFLQ96LU7 910 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 ZNF512Q96ME7 567 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-212ENST00000601919 CDK5RAP1Q96SZ6 601 aaKnown RBP19.43■□□□□ 0.7
SSBP4-212ENST00000601919 GOLPH3Q9H4A6 298 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 MAGED2Q9UNF1 606 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-212ENST00000601919 USTQ9Y2C2 406 aa19.43■□□□□ 0.7
SSBP4-212ENST00000601919 COL4A4P53420 1690 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-212ENST00000601919 CCDC66A2RUB6 948 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 HOXA9P31269 272 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 PCK1P35558 622 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 ZNF252P-AS1Q0IIN9 211 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 MTMR3Q13615 1198 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 CCDC14Q49A88 953 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 CC2D1AQ6P1N0 951 aaPredicted RBP19.42■□□□□ 0.7
SSBP4-212ENST00000601919 HFE2Q6ZVN8 426 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 STRADAQ7RTN6 431 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 TADA2BQ86TJ2 420 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 RHOT1Q8IXI2 618 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 SLC22A17Q8WUG5 538 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 CFAP57Q96MR6 1250 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 ZNF576Q9H609 170 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 MAN1C1Q9NR34 630 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 OLA1Q9NTK5 396 aaKnown RBP19.42■□□□□ 0.7
SSBP4-212ENST00000601919 CLIC5Q9NZA1 410 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 GMIPQ9P107 970 aa19.42■□□□□ 0.7
SSBP4-212ENST00000601919 ATG2AQ2TAZ0 1938 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 ENC1O14682 589 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 PSTPIP1O43586 416 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 F9P00740 461 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 HNRNPA1P09651 372 aaKnown RBP eCLIP19.41■□□□□ 0.7
SSBP4-212ENST00000601919 GBP1P32455 592 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 SULT1E1P49888 294 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 ATP11AP98196 1134 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 TUBB2AQ13885 445 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 DUSP6Q16828 381 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 PABPC1LQ4VXU2 614 aaKnown RBP19.41■□□□□ 0.7
SSBP4-212ENST00000601919 LRRC38Q5VT99 294 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 TRNP1Q6NT89 227 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 SND1Q7KZF4 910 aaKnown RBP eCLIP19.41■□□□□ 0.7
SSBP4-212ENST00000601919 RSRC2Q7L4I2 434 aaKnown RBP19.41■□□□□ 0.7
SSBP4-212ENST00000601919 DNAJB7Q7Z6W7 309 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-212ENST00000601919 STKLD1Q8NE28 680 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 FAM172AQ8WUF8 416 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 HES6Q96HZ4 224 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 NPY6RQ99463 290 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 TUBB2BQ9BVA1 445 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 TRPM5Q9NZQ8 1165 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 NAALADL1Q9UQQ1 740 aa19.41■□□□□ 0.7
SSBP4-212ENST00000601919 EPOPA6NHQ4 379 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 SPDYE4A6NLX3 237 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 ZMYND10O75800 440 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 FGF19O95750 216 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 ATP1A1P05023 1023 aaKnown RBP19.4■□□□□ 0.7
SSBP4-212ENST00000601919 FYNP06241 537 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 KRT7P08729 469 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 PRLRP16471 622 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 HMGA1P17096 107 aaKnown RBP19.4■□□□□ 0.7
SSBP4-212ENST00000601919 TCP1P17987 556 aaKnown RBP19.4■□□□□ 0.7
SSBP4-212ENST00000601919 CTNNA2P26232 953 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 CTNNA1P35221 906 aaKnown RBP19.4■□□□□ 0.7
SSBP4-212ENST00000601919 CDO1Q16878 200 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 PAPD7Q5XG87 772 aaKnown RBP19.4■□□□□ 0.7
SSBP4-212ENST00000601919 SCD5Q86SK9 330 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 EDEM1Q92611 657 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 CENPIQ92674 756 aaPredicted RBP19.4■□□□□ 0.7
SSBP4-212ENST00000601919 NT5C3BQ969T7 300 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 TLR10Q9BXR5 811 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 LMCD1Q9NZU5 365 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 SNX12Q9UMY4 172 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 HYOU1Q9Y4L1 999 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 SAR1BQ9Y6B6 198 aa19.4■□□□□ 0.7
SSBP4-212ENST00000601919 TNRC18O15417 2968 aaPredicted RBP19.4■□□□□ 0.7
SSBP4-212ENST00000601919 M0QYT0 321 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 PER2O15055 1255 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 PRPSAP2O60256 369 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 XYLBO75191 536 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 LRCH4O75427 683 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 ZDHHC11BP0C7U3 371 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 RDXP35241 583 aaKnown RBP19.39■□□□□ 0.69
SSBP4-212ENST00000601919 C15orf59Q2T9L4 293 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-212ENST00000601919 ODF2Q5BJF6 829 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 SNX30Q5VWJ9 437 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 SYPL2Q5VXT5 272 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 POLNQ7Z5Q5 900 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 RBM23Q86U06 439 aaKnown RBP19.39■□□□□ 0.69
SSBP4-212ENST00000601919 ZNF276Q8N554 614 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 CD101Q93033 1021 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 PGAP3Q96FM1 320 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-212ENST00000601919 TBCBQ99426 244 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 FAM204AQ9H8W3 233 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 ZDHHC7Q9NXF8 308 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 PCDHA3Q9Y5H8 950 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 HCFC2Q9Y5Z7 792 aa19.39■□□□□ 0.69
SSBP4-212ENST00000601919 NCK2O43639 380 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 ENDOD1O94919 500 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 POU2F2P09086 479 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 SRGAP2BP0DMP2 458 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 RARGP13631 454 aa19.38■□□□□ 0.69
SSBP4-212ENST00000601919 EPCAMP16422 314 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms