RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 WDTC1Q8N5D0 677 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 CSGALNACT1Q8TDX6 532 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 IPO4Q8TEX9 1081 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 CLEC4CQ8WTT0 213 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 SLC20A1Q8WUM9 679 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 BAP1Q92560 729 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 DNASE1L2Q92874 299 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 ZFYVE19Q96K21 471 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 PPP1R13BQ96KQ4 1090 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 EDEM3Q9BZQ6 932 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 SYNCQ9H7C4 482 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 WNT16Q9UBV4 365 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 DNMT3LQ9UJW3 386 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 NOCTQ9UK39 431 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 CA14Q9ULX7 337 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 TMEM221A6NGB7 291 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 LRRC53A6NM62 1247 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 YJEFN3A6XGL0 299 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 E7ENQ6 273 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 M0R296 226 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 MDM4O15151 490 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 IRF1P10914 325 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 IFNAR2P48551 515 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 CDR2Q01850 454 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 GOLGA8FQ08AF8 430 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 GOLGA8DPQ0D2H9 430 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 FIGNQ5HY92 759 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 BSPRYQ5W0U4 402 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 KLHDC10Q6PID8 442 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 BHLHA9Q7RTU4 235 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 TMEM110Q86TL2 294 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 SCUBE3Q8IX30 993 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 ZNF276Q8N554 614 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 RIN3Q8TB24 985 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 RNF139Q8WU17 664 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 FAM149B1Q96BN6 582 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 CPXM1Q96SM3 734 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 ANP32EQ9BTT0 268 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 TTYH3Q9C0H2 523 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 KCNH6Q9H252 994 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 GKN1Q9NS71 199 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 ABCC13Q9NSE7 274 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 OLA1Q9NTK5 396 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 CFAP97Q9P2B7 532 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 RASAL2Q9UJF2 1139 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 SH3BP1Q9Y3L3 701 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 MYOFQ9NZM1 2061 aa20.61■□□□□ 0.89
SHKBP1-214ENST00000597396 LSM8O95777 96 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 LTFP02788 710 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 CDH5P33151 784 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 ZXDBP98169 803 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 EFEMP1Q12805 493 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 ASIC2Q16515 512 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 SFMBT2Q5VUG0 894 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 MSANTD4Q8NCY6 345 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 EDEM1Q92611 657 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 PBXIP1Q96AQ6 731 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 IQCDQ96DY2 449 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 ARHGEF3Q9NR81 526 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 STRIP2Q9ULQ0 834 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 MIA3Q5JRA6 1907 aa20.6■□□□□ 0.89
SHKBP1-214ENST00000597396 PAPSS1O43252 624 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 CHRNB2P17787 502 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 FMO1Q01740 532 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 PTPN20Q4JDL3 420 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 SLC44A4Q53GD3 710 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 NAA35Q5VZE5 725 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 OR6B2Q6IFH4 312 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 TRIM72Q6ZMU5 477 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 ALYREFQ86V81 257 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 ERICH1Q86X53 443 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 MIB1Q86YT6 1006 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 SIX5Q8N196 739 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 ZNF397Q8NF99 534 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 ASIC4Q96FT7 647 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 ZFRQ96KR1 1074 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 KLF16Q9BXK1 252 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 RBSNQ9H1K0 784 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 MFSD1Q9H3U5 465 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 SEPT11Q9NVA2 429 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 DUS2Q9NX74 493 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 TJP2Q9UDY2 1190 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 WNT6Q9Y6F9 365 aa20.59■□□□□ 0.89
SHKBP1-214ENST00000597396 ITIH6Q6UXX5 1313 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 PIEZO1Q92508 2521 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 A0A1W2PQJ5 194 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 FAM170AA1A519 330 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 NOMO3P69849 1222 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 PDGFRLQ15198 375 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 MLF2Q15773 248 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 BMP8AQ7Z5Y6 402 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 OSCP1Q8WVF1 389 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 CPLX3Q8WVH0 158 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 TRIM62Q9BVG3 475 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 TRPV5Q9NQA5 729 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 HEBP1Q9NRV9 189 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 MARCH2Q9P0N8 246 aa20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 LSM7Q9UK45 103 aaKnown RBP20.58■□□□□ 0.89
SHKBP1-214ENST00000597396 E2F8A0AVK6 867 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms