RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 A0A087WUV0 522 aaPredicted RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 HACD1B0YJ81 288 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 TMEM189-UBE2V1I3L0A0 370 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 AOC2O75106 756 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 GRAP2O75791 330 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 GABBR2O75899 941 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 IFNB1P01574 187 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ELNP15502 786 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 IL4RP24394 825 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 PHBP35232 272 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ARL4AP40617 200 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ARL4CP56559 192 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 GNGT1P63211 74 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 BFSP2Q13515 415 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 RASA2Q15283 850 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ZSCAN26Q16670 478 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 CDO1Q16878 200 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 RAB41Q5JT25 222 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 RNASEH2BQ5TBB1 312 aaKnown RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 TRNP1Q6NT89 227 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 FAM171BQ6P995 826 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 DARS2Q6PI48 645 aaKnown RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 CLEC20AQ6ZU45 233 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 PAQR9Q6ZVX9 377 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 SLC24A5Q71RS6 500 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 PDZD4Q76G19 769 aaPredicted RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 BNIPLQ7Z465 357 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ZNF598Q86UK7 904 aaKnown RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 CDKL3Q8IVW4 592 aaPredicted RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 PLD5Q8N7P1 536 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 OR2W6PQ8NHA6 318 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 URGCPQ8TCY9 931 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 RTP4Q96DX8 246 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 PGAP3Q96FM1 320 aaPredicted RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 SLC2A13Q96QE2 648 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 RBM15Q96T37 977 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS25-203ENST00000589520 TMEM121Q9BTD3 319 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 SNRNP25Q9BV90 132 aaKnown RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 B3GNT5Q9BYG0 378 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ADAM7Q9H2U9 754 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 CSNK1G1Q9HCP0 422 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 CALCOCO1Q9P1Z2 691 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
VPS25-203ENST00000589520 ACTL7BQ9Y614 415 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 SZT2Q5T011 3432 aa10.82□□□□□ -0.68
VPS25-203ENST00000589520 PDCD11Q14690 1871 aaKnown RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 SCN1AP35498 2009 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 ARVCFO00192 962 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 PIK3R2O00459 728 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CAPN9O14815 690 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CHADO15335 359 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 TRAPPC3O43617 180 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 FKTNO75072 461 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CDH16O75309 829 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 AP1G2O75843 785 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 B3GAT3O94766 335 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 CD48P09326 243 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CKBP12277 381 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 TKTP29401 623 aaKnown RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 L1CAMP32004 1257 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CHKAP35790 457 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 HCAR3P49019 387 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 SULT1E1P49888 294 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 TKTL1P51854 596 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 MAGOHP61326 146 aaKnown RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 DYNLT1P63172 113 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 TSPY1Q01534 308 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 ADCY1Q08828 1119 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 TAF5Q15542 800 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CCDC142Q17RM4 750 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 ARL13BQ3SXY8 428 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 TIGD5Q53EQ6 642 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 MDH1BQ5I0G3 518 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 SH3PXD2AQ5TCZ1 1133 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 GLB1LQ6UWU2 654 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 FAM35AQ86V20 835 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 TDRPQ86YL5 185 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 DEFB106AQ8N104 65 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 PDIK1LQ8N165 341 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 NAT8LQ8N9F0 302 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CD99L2Q8TCZ2 262 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 PRCCQ92733 491 aaPredicted RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 LPPQ93052 612 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 NTAN1Q96AB6 310 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 FAM149B1Q96BN6 582 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 ACSF2Q96CM8 615 aaPredicted RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 PIWIL1Q96J94 861 aaKnown RBP10.81□□□□□ -0.68
VPS25-203ENST00000589520 SUSD3Q96L08 255 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 NPY6RQ99463 290 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 CRTAC1Q9NQ79 661 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 STARD7Q9NQZ5 370 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 NINJ2Q9NZG7 142 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 FZD10Q9ULW2 581 aa10.81□□□□□ -0.68
VPS25-203ENST00000589520 AP4E1Q9UPM8 1137 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms