RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ASAH2Q9NR71 780 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 COL1A2P08123 1366 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 RGPD2P0DJD1 1756 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 SNHG28P0DPA3 235 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 SLC6A3Q01959 620 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 CREMQ03060 361 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ZDHHC17Q8IUH5 632 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 SPATA16Q9BXB7 569 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 TKTL2Q9H0I9 626 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 SPG21Q9NZD8 308 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ARHGAP20Q9P2F6 1191 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
PTPN21-208ENST00000556564 TRAV19A0A0A6YYK7 116 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ARFIP2P53365 341 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 GIT1Q9Y2X7 761 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 CCNE2O96020 404 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 KYNUQ16719 465 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 PRMT1Q99873 361 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 DNAJC18Q9H819 358 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 TRMT6Q9UJA5 497 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 VAV3Q9UKW4 847 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 STIP1P31948 543 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 NOL9Q5SY16 702 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 LRRC8DQ7L1W4 858 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 OOSP2Q86WS3 158 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 UPF3AQ9H1J1 476 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 VANGL2Q9ULK5 521 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 FGBP02675 491 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 PSMD5Q16401 504 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 EEF1DP3Q658K8 133 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 MEFVO15553 781 aaPredicted RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 HSPA9P38646 679 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 ZNF268Q14587 947 aaPredicted RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 DENND1BQ6P3S1 775 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 TMA16Q96EY4 203 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 ERP44Q9BS26 406 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 POPDC2Q9HBU9 364 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 PCDHGB4Q9UN71 923 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 MRPS23Q9Y3D9 190 aaKnown RBP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 TOMM70O94826 608 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 NCKAP1LP55160 1127 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 GRIK3Q13003 919 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 PCBP1Q15365 356 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPN21-208ENST00000556564 RD3Q7Z3Z2 195 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 ADGRE3Q9BY15 652 aa17.92■□□□□ 0.46
PTPN21-208ENST00000556564 IFNA8P32881 189 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 COL9A3Q14050 684 aaPredicted RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 CLEC4DQ8WXI8 215 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 KCTD10Q9H3F6 313 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 RBM22Q9NW64 420 aaKnown RBP eCLIP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 ADA2Q9NZK5 511 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 LTFP02788 710 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 AMPD1P23109 780 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 DCLRE1AQ6PJP8 1040 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 INPP4AQ96PE3 977 aaPredicted RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 KDM4CQ9H3R0 1056 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 OSGEPL1Q9H4B0 414 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 ABCC13Q9NSE7 274 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 ITM2BQ9Y287 266 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 CAPN6Q9Y6Q1 641 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 WNT7AO00755 349 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 ADH1AP07327 375 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 BRCC3P46736 316 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 STN1Q9H668 368 aaKnown RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 IARS2Q9NSE4 1012 aaKnown RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 RPS6KL1Q9Y6S9 549 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 NCF1BA6NI72 391 aaPredicted RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 NCF1CA8MVU1 366 aaPredicted RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 NCF1P14598 390 aaPredicted RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 ARF4P18085 180 aaPredicted RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 MARCH2Q9P0N8 246 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 CDH9Q9ULB4 789 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 A8MX80 341 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 CLDN5O00501 218 aa17.91■□□□□ 0.46
PTPN21-208ENST00000556564 CLNS1AP54105 237 aaKnown RBP17.91■□□□□ 0.46
PTPN21-208ENST00000556564 NT5DC1Q5TFE4 455 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 NT5DC3Q86UY8 548 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 COLGALT1Q8NBJ5 622 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 B3GALNT2Q8NCR0 500 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 KAT5Q92993 513 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 POLR2EP19388 210 aaKnown RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 ATP5C1P36542 298 aaKnown RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 FIGNQ5HY92 759 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 ZNF697Q5TEC3 545 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 UGT3A1Q6NUS8 523 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 PKN3Q6P5Z2 889 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 LCA5Q86VQ0 697 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 TEKT4Q8WW24 435 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 FGFR1OP2Q9NVK5 253 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 PKNOX2Q96KN3 472 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 HSD17B14Q9BPX1 270 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 FRMD8P1Q9BZ68 369 aaPredicted RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 TRIM45Q9H8W5 580 aaPredicted RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 TRMT13Q9NUP7 481 aaKnown RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 RRN3Q9NYV6 651 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 ZMYND8Q9ULU4 1186 aaPredicted RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 TRDMT1O14717 391 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms