RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 NPHP3-ACAD11A0A0J9YXS1 232 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 A8MV72 311 aaPredicted RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 AP3B1O00203 1094 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CACNB4O00305 520 aaPredicted RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 RIPK2O43353 540 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 PROM1O43490 865 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 SMPD2O60906 423 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CLASP2O75122 1294 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 MSL3P1P0C860 447 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 COL6A2P12110 1019 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 GZMAP12544 262 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 PSMC2P35998 433 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 PGM1P36871 562 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 MXI1P50539 228 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 ARFIP2P53365 341 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 PSMC6P62333 389 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 RPP30P78346 268 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 HTD2P86397 168 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 MECOMQ03112 1051 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 SPIRE1Q08AE8 756 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 SCAPQ12770 1279 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CBX3Q13185 183 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 DCTN2Q13561 401 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 LASP1Q14847 261 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 ZNF805Q5CZA5 627 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CATSPEREQ5SY80 951 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 ERMARDQ5T6L9 678 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 MBLAC2Q68D91 279 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 RCSD1Q6JBY9 416 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 LPCAT2Q7L5N7 544 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CCDC186Q7Z3E2 898 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 DZIP1Q86YF9 867 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 GALNT4Q8N4A0 578 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 DPP10Q8N608 796 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 LZTR1Q8N653 840 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 VGLL2Q8N8G2 317 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 TDRD5Q8NAT2 981 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 USP38Q8NB14 1042 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 DENND6BQ8NEG7 585 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 OR2I1PQ8NGU4 316 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 GPR150Q8NGU9 434 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 OR6B3Q8NGW1 331 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 METTL6Q8TCB7 284 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 ANKRD49Q8WVL7 239 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CRACR2AQ9BSW2 395 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 MYL10Q9BUA6 226 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 MAK16Q9BXY0 300 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 OSBPL6Q9BZF3 934 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 TBC1D23Q9NUY8 699 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 UTP6Q9NYH9 597 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 TAS2R10Q9NYW0 307 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 SELENONQ9NZV5 590 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 MRPL15Q9P015 296 aaKnown RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 C6orf203Q9P0P8 240 aaPredicted RBP6.71□□□□□ -1.34
VPS29-210ENST00000552130 EXTL2Q9UBQ6 330 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 ZNF212Q9UDV6 495 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CFAP45Q9UL16 551 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 KLHL20Q9Y2M5 609 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 DERAQ9Y315 318 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 PCDHA1Q9Y5I3 950 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 CDY2AQ9Y6F7 541 aa6.71□□□□□ -1.34
VPS29-210ENST00000552130 PIK3R4Q99570 1358 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 A0A1W2PQ09 198 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 CCDC151A5D8V7 595 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 UBXN8O00124 270 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 TBC1D4O60343 1298 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 KRT38O76015 456 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 KIF20AO95235 890 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 APOL3O95236 402 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 OPN1MWP04001 364 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 OPN1MW2P0DN77 364 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 OPN1MW3P0DN78 364 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 HOXD10P28358 340 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 EPHA8P29322 1005 aaPredicted RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 GGT5P36269 586 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 BCL6P41182 706 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 MTHFRP42898 656 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 LIMS1P48059 325 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 HARS2P49590 506 aaKnown RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 FLT3LGP49771 235 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 SULT1E1P49888 294 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 SESN2P58004 480 aaPredicted RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 C21orf58P58505 322 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 MGAT2Q10469 447 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 EIF2B5Q13144 721 aaKnown RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 SGCGQ13326 291 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 NR1I3Q14994 352 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 KHDC1Q4VXA5 237 aaKnown RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 HABP4Q5JVS0 413 aaKnown RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 TTC39AQ5SRH9 613 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 C10orf76Q5T2E6 689 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 CCDC183Q5T5S1 534 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 FAXCQ5TGI0 409 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 NAA35Q5VZE5 725 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 EEF1DP3Q658K8 133 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 CAVIN1Q6NZI2 390 aaKnown RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 LRRC8DQ7L1W4 858 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms