RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 UPP1Q16831 310 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 BBS9Q3SYG4 887 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 WDR59Q6PJI9 974 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 LCLAT1Q6UWP7 414 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 CFAP36Q96G28 342 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 FAM114A2Q9NRY5 505 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 KAT6AQ92794 2004 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 GOLGA8MH3BSY2 632 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 DDHD2O94830 711 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 ENDOD1O94919 500 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 MAP3K6O95382 1288 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 ZC3H12AQ5D1E8 599 aaKnown RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 NUGGCQ68CJ6 796 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 ANKRD33Q7Z3H0 272 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 MON1AQ86VX9 555 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 SPATA18Q8TC71 538 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 C2orf15Q8WU43 125 aaKnown RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 CDKL2Q92772 493 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 CINPQ9BW66 212 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 RHOBTB2Q9BYZ6 727 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 RSPH14Q9UHP6 348 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 PLA2G4CQ9UP65 541 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 SLC9A3R1O14745 358 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 TUBP50607 506 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 OXCT1P55809 520 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 SMAD3P84022 425 aaKnown RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 SLC7A5Q01650 507 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 TPGS2Q68CL5 300 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 BAP1Q92560 729 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 AGAP3Q96P47 875 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 B3GNT5Q9BYG0 378 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 CNGB3Q9NQW8 809 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 CBX4O00257 560 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 O00370 1275 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 SPTLC1O15269 473 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 HOXD8P13378 290 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 PDK2Q15119 407 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 C15orf59Q2T9L4 293 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 CLLU1OSQ5K130 101 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 CCDC137Q6PK04 289 aaKnown RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 FAM43BQ6ZT52 329 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 MCRS1Q96EZ8 462 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 MS4A14Q96JA4 679 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 TTC25Q96NG3 672 aa9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 AFF4Q9UHB7 1163 aaKnown RBP9.83□□□□□ -0.84
GAPVD1-219ENST00000495955 PRKCIP41743 596 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 NOMO3P69849 1222 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 GPS1Q13098 491 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 TBX2Q13207 712 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 MTA1Q13330 715 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 ZRSR2Q15696 482 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 SYCP2LQ5T4T6 812 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 MTERF4Q7Z6M4 381 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 LNX1Q8TBB1 728 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 NDRG1Q92597 394 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 KCNK16Q96T55 309 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 HNRNPABQ99729 332 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 DDX47Q9H0S4 455 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 MAN1C1Q9NR34 630 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 SFMBT1Q9UHJ3 866 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 VANGL2Q9ULK5 521 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 TBC1D4O60343 1298 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 KRT14P02533 472 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 KRT15P19012 456 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 OR1E1P30953 314 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 SOX4Q06945 474 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 MTMR3Q13615 1198 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 UBXN11Q5T124 520 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 DDX42Q86XP3 938 aaKnown RBP eCLIP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 WDR24Q96S15 920 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 FIZ1Q96SL8 496 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 PAAF1Q9BRP4 392 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 HMGXB4Q9UGU5 601 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 BMPR1AP36894 532 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 MAGEA10P43363 369 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 POLD3Q15054 466 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 PIK3R5Q8WYR1 880 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 ARHGEF26Q96DR7 871 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 TSPYL1Q9H0U9 437 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 PTPRHQ9HD43 1115 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 NAALADL1Q9UQQ1 740 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 SLC38A8A6NNN8 435 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 ZNF185O15231 689 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 ERBB2P04626 1255 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 PMLP29590 882 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 PLA2G4AP47712 749 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 PCSK7Q16549 785 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 PDIK1LQ8N165 341 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 ZSWIM1Q9BR11 485 aa9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 DICER1Q9UPY3 1922 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-219ENST00000495955 SIGLEC16A6NMB1 481 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 TRDMT1O14717 391 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 SYNCRIPO60506 623 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 EZRP15311 586 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 ATP5DP30049 168 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 CHRNA3P32297 505 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 MAMLD1Q13495 774 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms