RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 C10orf120Q5SQS8 335 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 MSANTD2Q6P1R3 559 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 C1orf131Q8NDD1 294 aaKnown RBP11.62□□□□□ -0.55
CPSF7-212ENST00000489728 CSGALNACT1Q8TDX6 532 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 IPO4Q8TEX9 1081 aaKnown RBP11.62□□□□□ -0.55
CPSF7-212ENST00000489728 OSCP1Q8WVF1 389 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 ATP2A3Q93084 1043 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 ZFRQ96KR1 1074 aaKnown RBP11.62□□□□□ -0.55
CPSF7-212ENST00000489728 LRRC3BQ96PB8 259 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 FAM83CQ9BQN1 747 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 TTYH3Q9C0H2 523 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 SMG9Q9H0W8 520 aaKnown RBP11.62□□□□□ -0.55
CPSF7-212ENST00000489728 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 C8orf33Q9H7E9 229 aaPredicted RBP11.62□□□□□ -0.55
CPSF7-212ENST00000489728 ACP6Q9NPH0 428 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 ASNSD1Q9NWL6 643 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 OSER1Q9NX31 292 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 TBC1D14Q9P2M4 693 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 TECTAO75443 2155 aa11.62□□□□□ -0.55
CPSF7-212ENST00000489728 E5RJQ4 531 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 MAN2B1O00754 1011 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 GABBR2O75899 941 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 CALCAP01258 141 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 LTFP02788 710 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 LCP1P13796 627 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 PGFP49763 221 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 RGS7P49802 495 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 STARD6P59095 220 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 COG7P83436 770 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 AMPD2Q01433 879 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 TRIM14Q14142 442 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 MLF2Q15773 248 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 ITPRIPL2Q3MIP1 535 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 BSPRYQ5W0U4 402 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 BTBD8Q5XKL5 378 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 PPP1R2P3Q6NXS1 205 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 SARM1Q6SZW1 724 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 TOGARAM2Q6ZUX3 1019 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 RSRC2Q7L4I2 434 aaKnown RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 NOP9Q86U38 636 aaKnown RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 CPA6Q8N4T0 437 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 WDTC1Q8N5D0 677 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 RNF139Q8WU17 664 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 BAP1Q92560 729 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 SYN2Q92777 582 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 PPP1R13BQ96KQ4 1090 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 DDX23Q9BUQ8 820 aaKnown RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 KLF16Q9BXK1 252 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 OSBPL6Q9BZF3 934 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 SMOC2Q9H3U7 446 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 ST7Q9NRC1 585 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 TMEM51Q9NW97 253 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 AIPL1Q9NZN9 384 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 IFNKQ9P0W0 207 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 CYTH4Q9UIA0 394 aa11.61□□□□□ -0.55
CPSF7-212ENST00000489728 LSM7Q9UK45 103 aaKnown RBP11.61□□□□□ -0.55
CPSF7-212ENST00000489728 TICRRQ7Z2Z1 1910 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 KRBA1A5PL33 1030 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 YJEFN3A6XGL0 299 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 E7ENQ6 273 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 NFATC1O95644 943 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 CYP1A1P04798 512 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-212ENST00000489728 GABRB2P47870 512 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 IFNAR2P48551 515 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 CLCN5P51795 746 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 NOMO3P69849 1222 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 ZXDBP98169 803 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 NNTQ13423 1086 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 SLC44A4Q53GD3 710 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 EFHC1Q5JVL4 640 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 HTR3DQ70Z44 454 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 RALGPS2Q86X27 583 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-212ENST00000489728 PASD1Q8IV76 773 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 SIX5Q8N196 739 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 FBXL6Q8N531 539 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 ZNF397Q8NF99 534 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-212ENST00000489728 RIN3Q8TB24 985 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 PLD4Q96BZ4 506 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 CPXM1Q96SM3 734 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 NELL2Q99435 816 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 DCLK3Q9C098 648 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 MFSD1Q9H3U5 465 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 C11orf16Q9NQ32 467 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 GKN1Q9NS71 199 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 DUS2Q9NX74 493 aaKnown RBP11.6□□□□□ -0.55
CPSF7-212ENST00000489728 MARCH2Q9P0N8 246 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 CFAP97Q9P2B7 532 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 ZNF510Q9Y2H8 683 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
CPSF7-212ENST00000489728 SH3BP1Q9Y3L3 701 aa11.6□□□□□ -0.55
CPSF7-212ENST00000489728 HBS1LQ9Y450 684 aaKnown RBP11.6□□□□□ -0.55
CPSF7-212ENST00000489728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.6□□□□□ -0.554e-11■■□□□ 12.6
CPSF7-212ENST00000489728 LRRC53A6NM62 1247 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 PAPSS1O43252 624 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-212ENST00000489728 HSF2BPO75031 334 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 LATS1O95835 1130 aa11.59□□□□□ -0.55
CPSF7-212ENST00000489728 MMEP08473 750 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms