RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 NCAM1P13591 858 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SCNN1AP37088 669 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 IFNAR2P48551 515 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 YWHAZP63104 245 aaKnown RBP6.68□□□□□ -1.34
SF3B1-206ENST00000462613 NOMO3P69849 1222 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SLC7A9P82251 487 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CDK17Q00537 523 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 FMO1Q01740 532 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SLC6A3Q01959 620 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CENPCQ03188 943 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 EFEMP1Q12805 493 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 NR1H3Q13133 447 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 MTA1Q13330 715 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 HTR4Q13639 388 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CLEC16AQ2KHT3 1053 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 FAM78AQ5JUQ0 283 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 STXBP5Q5T5C0 1151 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 FAM102AQ5T9C2 384 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-206ENST00000462613 BSPRYQ5W0U4 402 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 C1orf228Q6PIY5 440 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SND1Q7KZF4 910 aaKnown RBP eCLIP6.68□□□□□ -1.34
SF3B1-206ENST00000462613 BEND5Q7L4P6 421 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 IRF2BP2Q7Z5L9 587 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 RNF135Q8IUD6 432 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 MFSD6LQ8IWD5 586 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SCUBE3Q8IX30 993 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 KIAA1958Q8N8K9 716 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SLC20A1Q8WUM9 679 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CPA5Q8WXQ8 436 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 DDX1Q92499 740 aaKnown RBP6.68□□□□□ -1.34
SF3B1-206ENST00000462613 OTUB2Q96DC9 234 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 VCPIP1Q96JH7 1222 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CCDC42Q96M95 316 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SERPINB11Q96P15 392 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CPXM1Q96SM3 734 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 KXD1Q9BQD3 176 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 ZSWIM1Q9BR11 485 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SELENOOQ9BVL4 669 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SLC46A2Q9BY10 475 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 DCLK3Q9C098 648 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 KCNK12Q9HB15 430 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 TRPV4Q9HBA0 871 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 ABHD10Q9NUJ1 306 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.68□□□□□ -1.34
SF3B1-206ENST00000462613 ASNSD1Q9NWL6 643 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 ADAM22Q9P0K1 906 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 MARCH2Q9P0N8 246 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 IMPACTQ9P2X3 320 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 FBXL21Q9UKT6 434 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF510Q9Y2H8 683 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 CPQQ9Y646 472 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 COL6A3P12111 3177 aa6.68□□□□□ -1.34
SF3B1-206ENST00000462613 SSU72P8A0A1W2PR75 194 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SLC12A8A0AV02 714 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 E2F8A0AVK6 867 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 TYW5A2RUC4 315 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 YJEFN3A6XGL0 299 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 E7ENQ6 273 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 ANHXE9PGG2 379 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 GOLGA8SH3BPF8 625 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CHADO15335 359 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 PAPSS1O43252 624 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 COCHO43405 550 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DCXO43602 365 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 RTN2O75298 545 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MOSPD3O75425 235 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 ADCY5O95622 1261 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 NFATC1O95644 943 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 OLFM2O95897 454 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 APOEP02649 317 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CYP1A1P04798 512 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MYBL1P10243 752 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SLC2A3P11169 496 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SKILP12757 684 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 UNGP13051 313 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 TCF3P15923 654 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MMP8P22894 467 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CDC25BP30305 580 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 GDI1P31150 447 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 HNRNPH3P31942 346 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CYLC1P35663 651 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 RPL34P49207 117 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 HARS2P49590 506 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MRE11P49959 708 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 GSDMDP57764 484 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 C1QBPQ07021 282 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 NNTQ13423 1086 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MTF1Q14872 753 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 PDGFRLQ15198 375 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 PREPLQ4J6C6 727 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 PTPN20Q4JDL3 420 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DCAF6Q58WW2 860 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 NUGGCQ68CJ6 796 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 TANGO2Q6ICL3 276 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 ACAD10Q6JQN1 1059 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DNAJC24Q6P3W2 148 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DCUN1D2Q6PH85 259 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 PARM1Q6UWI2 310 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MMS22LQ6ZRQ5 1243 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 FAM183BPQ6ZVS7 135 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms