RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 POLMQ9NP87 494 aaPredicted RBP22.2■■□□□ 1.14
VSX1-206ENST00000444511 CYLDQ9NQC7 956 aa22.2■■□□□ 1.14
VSX1-206ENST00000444511 RXFP3Q9NSD7 469 aa22.2■■□□□ 1.14
VSX1-206ENST00000444511 DEC1Q9P2X7 70 aa22.2■■□□□ 1.14
VSX1-206ENST00000444511 LSM7Q9UK45 103 aaKnown RBP22.2■■□□□ 1.14
VSX1-206ENST00000444511 RALGAPA1Q6GYQ0 2036 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 HHLA1C9JL84 531 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 SGK1O00141 431 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 TULP3O75386 442 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 NUDT18Q6ZVK8 323 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 HTR3DQ70Z44 454 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 ETFBKMTQ8IXQ9 262 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 SMYD4Q8IYR2 804 aaPredicted RBP22.19■■□□□ 1.14
VSX1-206ENST00000444511 WHAMMQ8TF30 809 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 EEF2KMTQ96G04 330 aa22.19■■□□□ 1.14
VSX1-206ENST00000444511 KLF16Q9BXK1 252 aaPredicted RBP22.19■■□□□ 1.14
VSX1-206ENST00000444511 EML5Q05BV3 1969 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 BCLAF3A2AJT9 711 aaKnown RBP22.18■■□□□ 1.14
VSX1-206ENST00000444511 CETN3O15182 167 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 STX10O60499 249 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 CAVIN2O95810 425 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 EPB41P11171 864 aaKnown RBP22.18■■□□□ 1.14
VSX1-206ENST00000444511 HNRNPLP14866 589 aaKnown RBP eCLIP22.18■■□□□ 1.14
VSX1-206ENST00000444511 MXI1P50539 228 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 ZNF394Q53GI3 561 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 STPG1Q5TH74 334 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 PMS2CLQ68D20 193 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 PHTF2Q8N3S3 785 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 ZDHHC4Q9NPG8 344 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 RMND1Q9NWS8 449 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 OSER1Q9NX31 292 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 BCCIPQ9P287 314 aaKnown RBP eCLIP22.18■■□□□ 1.14
VSX1-206ENST00000444511 CIZ1Q9ULV3 898 aaPredicted RBP22.18■■□□□ 1.14
VSX1-206ENST00000444511 SDK1Q7Z5N4 2213 aa22.18■■□□□ 1.14
VSX1-206ENST00000444511 SPAG17Q6Q759 2223 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 A0A1W2PQH9 124 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 ADRB1P08588 477 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 CHRM1P11229 460 aaPredicted RBP22.17■■□□□ 1.14
VSX1-206ENST00000444511 RARGP13631 454 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 PNOCQ13519 176 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 C10orf76Q5T2E6 689 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 PPP1R26Q5T8A7 1209 aaPredicted RBP22.17■■□□□ 1.14
VSX1-206ENST00000444511 TCEAL6Q6IPX3 200 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 TRMT11Q7Z4G4 463 aaKnown RBP22.17■■□□□ 1.14
VSX1-206ENST00000444511 TTC39CQ8N584 583 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 FBXL13Q8NEE6 735 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 TCEAL3Q969E4 200 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 HEXIM2Q96MH2 286 aaKnown RBP22.17■■□□□ 1.14
VSX1-206ENST00000444511 DUSP16Q9BY84 665 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 NMUR1Q9HB89 426 aa22.17■■□□□ 1.14
VSX1-206ENST00000444511 GOLGA6L4A6NEF3 574 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 NEDD8-MDP1E9PL57 170 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 GREM1O60565 184 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 BCKDHBP21953 392 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 KIF11P52732 1056 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 C10orf120Q5SQS8 335 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 GRAMD4Q6IC98 578 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 KLHDC10Q6PID8 442 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 TADA2BQ86TJ2 420 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 PGBD3Q8N328 593 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 ZNF513Q8N8E2 541 aaPredicted RBP22.16■■□□□ 1.14
VSX1-206ENST00000444511 TERB1Q8NA31 727 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 OLIG1Q8TAK6 271 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 KCNV2Q8TDN2 545 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 HMGB4Q8WW32 186 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 SEMA4DQ92854 862 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 FAXDC2Q96IV6 333 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 SPACA7Q96KW9 195 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 XPO6Q96QU8 1125 aaKnown RBP22.16■■□□□ 1.14
VSX1-206ENST00000444511 BBS2Q9BXC9 721 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 CISHQ9NSE2 258 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 DNAJC17Q9NVM6 304 aaKnown RBP22.16■■□□□ 1.14
VSX1-206ENST00000444511 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.16■■□□□ 1.14
VSX1-206ENST00000444511 RAB20Q9NX57 234 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 DNMT3LQ9UJW3 386 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 NAGPAQ9UK23 515 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 NUDT5Q9UKK9 219 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
VSX1-206ENST00000444511 TCRBV21S2A2A0A5A6 115 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 MDM4O15151 490 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 ADAM23O75077 832 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 PLA2G4AP47712 749 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 PSEN1P49768 467 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 MCCD1P59942 119 aaPredicted RBP22.15■■□□□ 1.14
VSX1-206ENST00000444511 TCERG1LQ5VWI1 586 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 RNF43Q68DV7 783 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 TPGS1Q6ZTW0 290 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 CCDC186Q7Z3E2 898 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 CYP2U1Q7Z449 544 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 TSG101Q99816 390 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 EDEM2Q9BV94 578 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 WDR35Q9P2L0 1181 aa22.15■■□□□ 1.14
VSX1-206ENST00000444511 TRIM24O15164 1050 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 MAP3K13O43283 966 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 RALAP11233 206 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 TYRP14679 529 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 P2RY2P41231 377 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 PRCPP42785 496 aa22.14■■□□□ 1.13
VSX1-206ENST00000444511 DHPSP49366 369 aaPredicted RBP22.14■■□□□ 1.13
VSX1-206ENST00000444511 DCAF17Q5H9S7 520 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms