RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ANGPTL2Q9UKU9 493 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 SCML2Q9UQR0 700 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 KIAA1549LQ6ZVL6 1849 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 MYOFQ9NZM1 2061 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 FAM237AA0A1B0GTK4 181 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 KCNK5O95279 499 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 IRF1P10914 325 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 KRT13P13646 458 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 BCKDHBP21953 392 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 ADORA2BP29275 332 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 DHPSP49366 369 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-219ENST00000440240 CLEC20AQ6ZU45 233 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 PGBD3Q8N328 593 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 CCDC150Q8NCX0 1101 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 KLF16Q9BXK1 252 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-219ENST00000440240 LSM7Q9UK45 103 aaKnown RBP21.9■■□□□ 1.1
CPNE1-219ENST00000440240 CIZ1Q9ULV3 898 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-219ENST00000440240 STARD13Q9Y3M8 1113 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 PCDHA5Q9Y5H7 936 aa21.9■■□□□ 1.1
CPNE1-219ENST00000440240 LNP1A1A4G5 178 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 C4orf47A7E2U8 309 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 ADAM23O75077 832 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 TBX18O95935 607 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 ACO1P21399 889 aaKnown RBP21.89■■□□□ 1.09
CPNE1-219ENST00000440240 PSMC2P35998 433 aaKnown RBP21.89■■□□□ 1.09
CPNE1-219ENST00000440240 GCLMP48507 274 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 PGFP49763 221 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 NDUFA8P51970 172 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 SPDYCQ5MJ68 293 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 KLHDC10Q6PID8 442 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 GUF1Q8N442 669 aaKnown RBP21.89■■□□□ 1.09
CPNE1-219ENST00000440240 ZNF513Q8N8E2 541 aaPredicted RBP21.89■■□□□ 1.09
CPNE1-219ENST00000440240 TERB1Q8NA31 727 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 RLN3Q8WXF3 142 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 XPO6Q96QU8 1125 aaKnown RBP21.89■■□□□ 1.09
CPNE1-219ENST00000440240 WDR35Q9P2L0 1181 aa21.89■■□□□ 1.09
CPNE1-219ENST00000440240 TCRBV21S2A2A0A5A6 115 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 PMLP29590 882 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 DPP6P42658 865 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 PLA2G4AP47712 749 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 DPYDQ12882 1025 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 ADAM9Q13443 819 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 C10orf76Q5T2E6 689 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 FAM186BQ8IYM0 893 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 TAS1R2Q8TE23 839 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 HMGB4Q8WW32 186 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 PIGKQ92643 395 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 WBP2Q969T9 261 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 TWNKQ96RR1 684 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 NIF3L1Q9GZT8 377 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 ZDHHC4Q9NPG8 344 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 TMEM9BQ9NQ34 198 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.88■■□□□ 1.091e-6■■■■■ 61.4
CPNE1-219ENST00000440240 MAPK8IP1Q9UQF2 711 aa21.88■■□□□ 1.09
CPNE1-219ENST00000440240 MAP1BP46821 2468 aaKnown RBP21.88■■□□□ 1.09
CPNE1-219ENST00000440240 THADAQ6YHU6 1953 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 HHLA1C9JL84 531 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 ZBTB24O43167 697 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-219ENST00000440240 GREM1O60565 184 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 GTF2H1P32780 548 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 PSEN1P49768 467 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 IRX4P78413 519 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 SHC2P98077 582 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 PPP3CAQ08209 521 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 GRAMD4Q6IC98 578 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 SDE2Q6IQ49 451 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 GPRIN1Q7Z2K8 1008 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 TADA2BQ86TJ2 420 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 ZNF276Q8N554 614 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 FAXDC2Q96IV6 333 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 BBS2Q9BXC9 721 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 SCAND2PQ9GZW5 306 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-219ENST00000440240 APOBEC3GQ9HC16 384 aaKnown RBP21.87■■□□□ 1.09
CPNE1-219ENST00000440240 EVLQ9UI08 416 aaPredicted RBP21.87■■□□□ 1.09
CPNE1-219ENST00000440240 DNMT3LQ9UJW3 386 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 ATP6V1DQ9Y5K8 247 aa21.87■■□□□ 1.09
CPNE1-219ENST00000440240 MYO18AQ92614 2054 aaKnown RBP21.87■■□□□ 1.09
CPNE1-219ENST00000440240 KMT2BQ9UMN6 2715 aaPredicted RBP21.86■■□□□ 1.09
CPNE1-219ENST00000440240 CEP295Q9C0D2 2601 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 GON4LQ3T8J9 2241 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 CYP26A1O43174 497 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 CACNG3O60359 315 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 CILPO75339 1184 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 PRR29P0C7W0 189 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 TRIM49P0CI25 452 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 TRIM49CP0CI26 452 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 RARGP13631 454 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 CD58P19256 250 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 NTSR1P30989 418 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 KIF11P52732 1056 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 MAP7D1Q3KQU3 841 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 KRBA2Q6ZNG9 492 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 SYT12Q8IV01 421 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 TMEFF1Q8IYR6 380 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 TTC39CQ8N584 583 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 JAKMIP2Q96AA8 810 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 CCDC34Q96HJ3 373 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 TMEM8AQ9HCN3 771 aa21.86■■□□□ 1.09
CPNE1-219ENST00000440240 DNAJC17Q9NVM6 304 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms