RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ZFYVE19Q96K21 471 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 ZFRQ96KR1 1074 aaKnown RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 KLF16Q9BXK1 252 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 PDCL3Q9H2J4 239 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 C8orf33Q9H7E9 229 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 HEBP1Q9NRV9 189 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 ABCC13Q9NSE7 274 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 OLA1Q9NTK5 396 aaKnown RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 DUS2Q9NX74 493 aaKnown RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 SMPD4Q9NXE4 827 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 MYO6Q9UM54 1294 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 MYO16Q9Y6X6 1858 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 TECTAO75443 2155 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 YJEFN3A6XGL0 299 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 E7ENQ6 273 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 GFPT2O94808 682 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 TBX18O95935 607 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 CCDC172P0C7W6 258 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 CDH5P33151 784 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-206ENST00000439717 UBASH3AP57075 661 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 COG7P83436 770 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 RUNX3Q13761 415 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 ITPRIPL2Q3MIP1 535 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 IER5LQ5T953 404 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 ZNF852Q6ZMS4 543 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 TPRG1Q6ZUI0 275 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
HSPG2-206ENST00000439717 PASD1Q8IV76 773 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 TMEM35BQ8NCS4 154 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 EPS8L1Q8TE68 723 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 DDX1Q92499 740 aaKnown RBP12.39□□□□□ -0.43
HSPG2-206ENST00000439717 NDRG1Q92597 394 aaKnown RBP12.39□□□□□ -0.43
HSPG2-206ENST00000439717 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 OTUB2Q96DC9 234 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 NELL2Q99435 816 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 TRIM62Q9BVG3 475 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 TBC1D17Q9HA65 648 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 ST7Q9NRC1 585 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 CFAP97Q9P2B7 532 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 TBC1D14Q9P2M4 693 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 MRPS17Q9Y2R5 130 aaKnown RBP12.39□□□□□ -0.43
HSPG2-206ENST00000439717 SH3BP1Q9Y3L3 701 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 PIAS3Q9Y6X2 628 aa12.39□□□□□ -0.43
HSPG2-206ENST00000439717 KIF26AQ9ULI4 1882 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-206ENST00000439717 HELZP42694 1942 aaKnown RBP12.39□□□□□ -0.43
HSPG2-206ENST00000439717 KANSL1LA0AUZ9 987 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 E5RJQ4 531 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 PIK3R2O00459 728 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 NFATC1O95644 943 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 LSM8O95777 96 aaKnown RBP12.38□□□□□ -0.43
HSPG2-206ENST00000439717 PDGFBP01127 241 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-206ENST00000439717 LTFP02788 710 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 KPNA1P52294 538 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-206ENST00000439717 AMPD2Q01433 879 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 TNK2Q07912 1038 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 EML3Q32P44 896 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 CWF19L1Q69YN2 538 aaKnown RBP12.38□□□□□ -0.43
HSPG2-206ENST00000439717 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-206ENST00000439717 HTR3DQ70Z44 454 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 BEND5Q7L4P6 421 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
HSPG2-206ENST00000439717 RALGPS2Q86X27 583 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-206ENST00000439717 SCUBE3Q8IX30 993 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 CPA6Q8N4T0 437 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 TTC16Q8NEE8 873 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 FLCNQ8NFG4 579 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 RNF139Q8WU17 664 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 PPP1R13BQ96KQ4 1090 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 NUP58Q9BVL2 599 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 OSBPL6Q9BZF3 934 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 MIS12Q9H081 205 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 EBF3Q9H4W6 596 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 HPS4Q9NQG7 708 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 NUDT5Q9UKK9 219 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 WNT6Q9Y6F9 365 aa12.38□□□□□ -0.43
HSPG2-206ENST00000439717 COL4A2P08572 1712 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 STK25O00506 426 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 PAPSS1O43252 624 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-206ENST00000439717 TPM3P06753 285 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 GLI1P08151 1106 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 FERP16591 822 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 AOC1P19801 751 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 PBX1P40424 430 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 CDR2Q01850 454 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 EFEMP1Q12805 493 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 NR1H3Q13133 447 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 TAF3Q5VWG9 929 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 TRIM68Q6AZZ1 485 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 MSANTD2Q6P1R3 559 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 TRIM72Q6ZMU5 477 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 ZDHHC17Q8IUH5 632 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 MSANTD4Q8NCY6 345 aa12.37□□□□□ -0.43
HSPG2-206ENST00000439717 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms