RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MAP4P27816 1152 aaKnown RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 CRYBB1P53674 252 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 SOX10P56693 466 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 LRRC14Q15048 493 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 SH2D3CQ8N5H7 860 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 EXT2Q93063 718 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ELMO2Q96JJ3 720 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 CDC42EP4Q9H3Q1 356 aaKnown RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ALDH2P05091 517 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 AIF1P55008 147 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 POU5F1Q01860 360 aaKnown RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 OVOS1Q6IE37 1185 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 MIPOL1Q8TD10 442 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 SYT15Q9BQS2 421 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ETNK1Q9HBU6 452 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TRPC5OSA6NMA1 111 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 PYGMP11217 842 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF177Q13360 481 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 PCMTD2Q9NV79 361 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 STK39Q9UEW8 545 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 CHADO15335 359 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TKTL1P51854 596 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TSTA3Q13630 321 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 HIC1Q14526 733 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 SPANXN3Q5MJ09 141 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TAS2R42Q7RTR8 314 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 CCNYL1Q8N7R7 359 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 MRPL1Q9BYD6 325 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 FNDC3AQ9Y2H6 1198 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 SMIM10L2AP0DMW4 78 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 SMIM10L2BP0DMW5 78 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 PSEN1P49768 467 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 RENBPP51606 427 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 USP10Q14694 798 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 CHSY1Q86X52 802 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 YAF2Q8IY57 180 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 HES6Q96HZ4 224 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 OXCT2Q9BYC2 517 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 UXTQ9UBK9 157 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 ERI2A8K979 691 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 MMP3P08254 477 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 ADCYAP1R1P41586 468 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 PREPLQ4J6C6 727 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 SMYD5Q6GMV2 418 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 MRNIPQ6NTE8 343 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 IRF2BP2Q7Z5L9 587 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TMEM121Q9BTD3 319 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TASP1Q9H6P5 420 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 CCT8L1PA6NM43 557 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 PMM2O15305 246 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF143P52747 638 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 RRP1BQ14684 758 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TAF11Q15544 211 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 CCDC153Q494R4 210 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TREML2Q5T2D2 321 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 GLI1P08151 1106 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TSHRP16473 764 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 ITGB3BPQ13352 177 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 LBX2Q6XYB7 198 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 DDX42Q86XP3 938 aaKnown RBP eCLIP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 MFN1Q8IWA4 741 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 HSFY1Q96LI6 401 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 POPDC2Q9HBU9 364 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 NDFIP2Q9NV92 336 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 ANKRD6Q9Y2G4 727 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 TFRCP02786 760 aaKnown RBP11.93□□□□□ -0.5
PTCH1-208ENST00000430669 MPOP05164 745 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 EPHB3P54753 998 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 JAM2P57087 298 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 GTF2H3Q13889 308 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 PCYOX1LQ8NBM8 494 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 PIP4K2CQ8TBX8 421 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 RPS6KL1Q9Y6S9 549 aa11.93□□□□□ -0.5
PTCH1-208ENST00000430669 MCM3APO60318 1980 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ANKRD63C9JTQ0 380 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 F5H423 210 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CRTAMO95727 393 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 NPR3P17342 541 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 DLG4P78352 724 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 EVX2Q03828 476 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 KCNA1Q09470 495 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 IPMKQ8NFU5 416 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 EGFL8Q99944 293 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 IGLV3-22A0A075B6J6 115 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 RIPK2O43353 540 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ACO1P21399 889 aaKnown RBP11.92□□□□□ -0.5
PTCH1-208ENST00000430669 TWF1Q12792 350 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 ARHGEF7Q14155 803 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 CTXN3Q4LDR2 81 aa11.92□□□□□ -0.5
PTCH1-208ENST00000430669 SCARA3Q6AZY7 606 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms