RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 XRRA1Q6P2D8 792 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 MTHFD1LQ6UB35 978 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SRLQ86TD4 932 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 DPP9Q86TI2 863 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SKAP1Q86WV1 359 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SFTPA1Q8IWL2 248 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SUN3Q8TAQ9 357 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 DAZAP1Q96EP5 407 aaKnown RBP5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SLC39A13Q96H72 371 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 KAZALD1Q96I82 304 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SGCZQ96LD1 299 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 CCDC138Q96M89 665 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 WDR24Q96S15 920 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 MAGEB5Q9BZ81 275 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 PCDHAC1Q9H158 963 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 TMEM8AQ9HCN3 771 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 ZMYND8Q9ULU4 1186 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 PRRT4C9JH25 899 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 H7C1Q1 480 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 M0R3H8 397 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 ADAMTS3O15072 1205 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 PRAMEF2O60811 474 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 MBPP02686 304 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 ATF7P17544 494 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 ABCB4P21439 1286 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 PBX1P40424 430 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 COPB1P53618 953 aaKnown RBP5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 EIF4A1P60842 406 aaKnown RBP5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 GPS1Q13098 491 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 MPEG1Q2M385 716 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 ARHGAP15Q53QZ3 475 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 IZUMO3Q5VZ72 239 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 MZT2AQ6P582 158 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 BEND5Q7L4P6 421 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 C11orf96Q7Z7L8 435 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 RAB11FIP4Q86YS3 637 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 TXLNBQ8N3L3 684 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 PNLDC1Q8NA58 520 aaKnown RBP5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 SH2D3AQ9BRG2 576 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 CERS4Q9HA82 394 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 RGL1Q9NZL6 768 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 STEAP1Q9UHE8 339 aa5.29□□□□□ -1.56
HMGB1P49-201ENST00000418882 A8MVJ9 347 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 WDR47O94967 919 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 EEF1GP26641 437 aaKnown RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 HSPA7P48741 367 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 TUBA4AP68366 448 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 MRPS21P82921 87 aaKnown RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 CLCA4Q14CN2 919 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 ACOX1Q15067 660 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 AASDHQ4L235 1098 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 CEP78Q5JTW2 689 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 TMTC4Q5T4D3 741 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 FAXCQ5TGI0 409 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 SRRM1Q8IYB3 904 aaKnown RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 FSTL5Q8N475 847 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 MAFAQ8NHW3 353 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 BRI3BPQ8WY22 251 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 VOPP1Q96AW1 172 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 EDC3Q96F86 508 aaKnown RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 SAP30LQ9HAJ7 183 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 ZBTB26Q9HCK0 441 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 MGAT4CQ9UBM8 478 aa5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 NKX1-2Q9UD57 310 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P49-201ENST00000418882 SETD1BQ9UPS6 1966 aaKnown RBP5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 DHHO43323 396 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 SNX2O60749 519 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 MT-CO3P00414 261 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 EGR1P18146 543 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 MPGP29372 298 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 GPC5P78333 572 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 SEC23BQ15437 767 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 PTF1AQ7RTS3 328 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 GJA10Q969M2 543 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 SNX27Q96L92 541 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 MYD88Q99836 296 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 VPS45Q9NRW7 570 aa5.27□□□□□ -1.57
HMGB1P49-201ENST00000418882 OR2W5A6NFC9 320 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 TMPRSS11DO60235 418 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 CELA2AP08217 269 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 TMEM225BP0DP42 221 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 CYP2D6P10635 497 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 CYP2A6P11509 494 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 ADRA1DP25100 572 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 SLC5A2P31639 672 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 SRSF4Q08170 494 aaKnown RBP5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 FAM187BQ17R55 369 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 SLC5A9Q2M3M2 681 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 MRNIPQ6NTE8 343 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 PNPLA1Q8N8W4 532 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 C8orf58Q8NAV2 365 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 DEPTORQ8TB45 409 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 ASB2Q96Q27 587 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 ELAC2Q9BQ52 826 aaKnown RBP5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 QTRT1Q9BXR0 403 aaKnown RBP5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 FSCN3Q9NQT6 498 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms