RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 MYO18AQ92614 2054 aaKnown RBP11.78□□□□□ -0.52
RFFL-204ENST00000414419 FAM186AA6NE01 2351 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 VPS13AQ96RL7 3174 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 M0QYV0 167 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 RNF225M0QZC1 329 aaPredicted RBP11.77□□□□□ -0.53
RFFL-204ENST00000414419 O00370 1275 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 PES1O00541 588 aaKnown RBP11.77□□□□□ -0.53
RFFL-204ENST00000414419 RNF40O75150 1001 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 ADH5P11766 374 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
RFFL-204ENST00000414419 USP8P40818 1118 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 YWHAGP61981 247 aaKnown RBP eCLIP11.77□□□□□ -0.53
RFFL-204ENST00000414419 COG7P83436 770 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 ADIGQ0VDE8 80 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 GAS6Q14393 721 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 MAN2A1Q16706 1144 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 EXOC3L4Q17RC7 722 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 ANO4Q32M45 955 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 PREPLQ4J6C6 727 aaPredicted RBP11.77□□□□□ -0.53
RFFL-204ENST00000414419 RAB41Q5JT25 222 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 LY6G5CQ5SRR4 150 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 TRIM65Q6PJ69 517 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 RHBDF2Q6PJF5 856 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 HTR3DQ70Z44 454 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 ASCL5Q7RTU5 278 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 SCD5Q86SK9 330 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 BBS7Q8IWZ6 715 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 ZNF276Q8N554 614 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 TFAP2BQ92481 460 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 MED15Q96RN5 788 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 PNKPQ96T60 521 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 ULBP1Q9BZM6 244 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 FBRSL1Q9HCM7 1045 aaKnown RBP11.77□□□□□ -0.53
RFFL-204ENST00000414419 RASAL2Q9UJF2 1139 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 STRIP2Q9ULQ0 834 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 SLC8A2Q9UPR5 921 aa11.77□□□□□ -0.53
RFFL-204ENST00000414419 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 GTPBP10A4D1E9 387 aaKnown RBP11.76□□□□□ -0.53
RFFL-204ENST00000414419 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.76□□□□□ -0.53
RFFL-204ENST00000414419 TULP2O00295 520 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 MDM4O15151 490 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 MED7O43513 233 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 MBD3O95983 291 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 APODP05090 189 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 LCP1P13796 627 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 SLC9A1P19634 815 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 BRD2P25440 801 aaKnown RBP11.76□□□□□ -0.53
RFFL-204ENST00000414419 OPRD1P41143 372 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 RGS7P49802 495 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 ARHGAP44Q17R89 818 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 HSP90AA4PQ58FG1 418 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 NAIF1Q69YI7 327 aaPredicted RBP11.76□□□□□ -0.53
RFFL-204ENST00000414419 PM20D1Q6GTS8 502 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 SASS6Q6UVJ0 657 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 IRF2BP1Q8IU81 584 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 ZBTB44Q8NCP5 570 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 GPT2Q8TD30 523 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 RNF139Q8WU17 664 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 KCTD13Q8WZ19 329 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 GOLGA1Q92805 767 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
RFFL-204ENST00000414419 KREMEN1Q96MU8 473 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 HINFPQ9BQA5 517 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 TUBGCP2Q9BSJ2 902 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 CNGB3Q9NQW8 809 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 SPHK2Q9NRA0 654 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 OLA1Q9NTK5 396 aaKnown RBP11.76□□□□□ -0.53
RFFL-204ENST00000414419 APEX2Q9UBZ4 518 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.76□□□□□ -0.53
RFFL-204ENST00000414419 ZNF510Q9Y2H8 683 aa11.76□□□□□ -0.53
RFFL-204ENST00000414419 KIAA1549LQ6ZVL6 1849 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 CHURC1-FNTBB4DL54 471 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
RFFL-204ENST00000414419 PAPSS2O95340 614 aaPredicted RBP11.75□□□□□ -0.53
RFFL-204ENST00000414419 TPM2P07951 284 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 HMBSP08397 361 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 EIF2DP41214 584 aaKnown RBP11.75□□□□□ -0.53
RFFL-204ENST00000414419 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 VWA3BQ502W6 1294 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 PKDCCQ504Y2 493 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 HEATR6Q6AI08 1181 aaKnown RBP11.75□□□□□ -0.53
RFFL-204ENST00000414419 NAT16Q8N8M0 369 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 RPLP0P6Q8NHW5 317 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 SLC35F5Q8WV83 523 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 NELL1Q92832 810 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 ACDQ96AP0 544 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 HSFY1Q96LI6 401 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
RFFL-204ENST00000414419 DCLK3Q9C098 648 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 NDST4Q9H3R1 872 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 ARHGEF4Q9NR80 690 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 ST7Q9NRC1 585 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 ABCC13Q9NSE7 274 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 MARCH2Q9P0N8 246 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 WDR35Q9P2L0 1181 aa11.75□□□□□ -0.53
RFFL-204ENST00000414419 RAB23Q9ULC3 237 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms