RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PTDSS2Q9BVG9 487 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 SORBS1Q9BX66 1292 aaKnown RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 FAM83DQ9H4H8 585 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 CXorf36Q9H7Y0 433 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 TMEM8AQ9HCN3 771 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 CD248Q9HCU0 757 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 LRRC37A3O60309 1634 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 MAP3K5Q99683 1374 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 PARP4Q9UKK3 1724 aaKnown RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 COL18A1P39060 1754 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 RGS10O43665 173 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 SRGAP2O75044 1071 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 PPFIA4O75335 1185 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 PECAM1P16284 738 aaPredicted RBP6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 NPTX2P47972 431 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 PRKAG1P54619 331 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 CXADRP78310 365 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 FAM189BP81408 668 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 FOXO1Q12778 655 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 FSTL1Q12841 308 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 POSTNQ15063 836 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 PTCHD3Q3KNS1 767 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 ARHGAP40Q5TG30 622 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 FAXCQ5TGI0 409 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 KRT73Q86Y46 540 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 ADGRG5Q8IZF4 528 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 KCNH5Q8NCM2 988 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 PPP2R3CQ969Q6 453 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 TMEM125Q96AQ2 219 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 SIN3AQ96ST3 1273 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 ZNF768Q9H5H4 540 aaKnown RBP6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 NDRG4Q9ULP0 352 aaKnown RBP6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 HPSEQ9Y251 543 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 MAP3K2Q9Y2U5 619 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 CCDC7Q96M83 1385 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 MYOM1P52179 1685 aa6.52□□□□□ -1.37
RNU4-39P-201ENST00000362455 EVC2Q86UK5 1308 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 TNS2Q63HR2 1409 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 NFAT5O94916 1531 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 ASNA1O43681 348 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 ITGA5P08648 1049 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 RPS7P62081 194 aaKnown RBP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 FPGSQ05932 587 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 PRKG1Q13976 671 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 CYP2A13Q16696 494 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 GEN1Q17RS7 908 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 SLC5A9Q2M3M2 681 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 RABL3Q5HYI8 236 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 RBM20Q5T481 1227 aaKnown RBP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 MANEALQ5VSG8 457 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 LIN54Q6MZP7 749 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 RGS7BPQ6MZT1 257 aaPredicted RBP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 MRNIPQ6NTE8 343 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 SPARTQ8N0X7 666 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 DNAJB14Q8TBM8 379 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 SNX19Q92543 992 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 NACC2Q96BF6 587 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 RNF31Q96EP0 1072 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 PRPF18Q99633 342 aaKnown RBP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 ZBTB26Q9HCK0 441 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 SAGE1Q9NXZ1 904 aa6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 SCAF8Q9UPN6 1271 aaKnown RBP6.51□□□□□ -1.37
RNU4-39P-201ENST00000362455 TTC21AQ8NDW8 1320 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 CD163L1Q9NR16 1453 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 MYADML2A6NDP7 307 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 MARCH11A6NNE9 402 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 F5H697 171 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 M0R3H8 397 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 COQ9O75208 318 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 NCR1O76036 304 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 HLA-DOAP06340 250 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 DHRS4L1P0CG22 281 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 HSD3B1P14060 373 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 ACRV1P26436 265 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 MST1P26927 711 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 CD6P30203 668 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 PPFIA1Q13136 1202 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 FZD5Q13467 585 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 TOB2Q14106 344 aaPredicted RBP6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 HLXQ14774 488 aaPredicted RBP6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 GPR162Q16538 588 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 VPS53Q5VIR6 699 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 JMJD6Q6NYC1 403 aaPredicted RBP6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 ZNF585AQ6P3V2 769 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 MICALCLQ6ZW33 695 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 GCC1Q96CN9 775 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 KRTAP4-12Q9BQ66 201 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 TRIM5Q9C035 493 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 SLC25A32Q9H2D1 315 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 DEF6Q9H4E7 631 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 GBA2Q9HCG7 927 aaPredicted RBP6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 AKIP1Q9NQ31 210 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 ST6GALNAC2Q9UJ37 374 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 GTF2A1LQ9UNN4 478 aa6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 TCAF1Q9Y4C2 921 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms