RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 RNF217Q8TC41 542 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 GPR78Q96P69 363 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 AGAP2Q99490 1192 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 HAUS8Q9BT25 410 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ISCUQ9H1K1 167 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ATXN3LQ9H3M9 355 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 RIC8AQ9NPQ8 531 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CYLDQ9NQC7 956 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 KLC4Q9NSK0 619 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 PSD3Q9NYI0 1048 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 VPS4AQ9UN37 437 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 SLC12A4Q9UP95 1085 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 USTQ9Y2C2 406 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 DNAJC16Q9Y2G8 782 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 A0A1W2PQ67 120 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CLDN5O00501 218 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CD247P20963 164 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 GNL1P36915 607 aaPredicted RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 ETFBP38117 255 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 SESN3P58005 492 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 MGAT3Q09327 533 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 GRIN2CQ14957 1233 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 MFSD5Q6N075 450 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 BZW1Q7L1Q6 419 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 METTL25Q8N6Q8 603 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 NPWQ8N729 165 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CCDC63Q8NA47 563 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 C1orf131Q8NDD1 294 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 OR9I1Q8NGQ6 314 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CAVIN3Q969G5 261 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 THAP9Q9H5L6 903 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 MOXD2PA6NHM9 499 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 A6NL46 340 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 C5orf67F2Z3F1 127 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 BUD23O43709 281 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 PPFIA2O75334 1257 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ASMTLO95671 621 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 PEPDP12955 493 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 UBAP2LQ14157 1087 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 CEP55Q53EZ4 464 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 LRIG3Q6UXM1 1119 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 LEKR1Q6ZMV7 388 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 HAUS6Q7Z4H7 955 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 RPAINQ86UA6 219 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 SLF2Q8IX21 1173 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 FAM71AQ8IYT1 594 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 UBA3Q8TBC4 463 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 RAET1EQ8TD07 263 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 HSPH1Q92598 858 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 ARHGEF2Q92974 986 aaKnown RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 ARSGQ96EG1 525 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 MYLK2Q9H1R3 596 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 EPN3Q9H201 632 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CNNM2Q9H8M5 875 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 CD320Q9NPF0 282 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 TIMM13Q9Y5L4 95 aaPredicted RBP5.91□□□□□ -1.46
CD47-201ENST00000355354 TRRAPQ9Y4A5 3859 aa5.91□□□□□ -1.46
CD47-201ENST00000355354 GSTTP1A0A1W2PQM5 241 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 DUSP11O75319 330 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 DDAH1O94760 285 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 CPP00450 1065 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 TPBGLP0DKB5 382 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 PDE1BQ01064 536 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 KBTBD12Q3ZCT8 623 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 FAM26DQ5JW98 314 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 ANKRD20A2Q5SQ80 823 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 ANKRD20A1Q5TYW2 823 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 ANKRD20A3Q5VUR7 823 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 GPRIN1Q7Z2K8 1008 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 MAATS1Q7Z4T9 603 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 FAM71BQ8TC56 605 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 ACTL9Q8TC94 416 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 CPT1BQ92523 772 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 VOPP1Q96AW1 172 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 MIEF2Q96C03 454 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 TEX37Q96LM6 180 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 SCLT1Q96NL6 688 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 TINF2Q9BSI4 451 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 CRNKL1Q9BZJ0 848 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 NAA50Q9GZZ1 169 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 ATP6V0A4Q9HBG4 840 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 SEPT11Q9NVA2 429 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 MAGEA13PA6NCF6 341 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 KCNK1O00180 336 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 TNPO2O14787 897 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 CASC3O15234 703 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 ZC3H11AO75152 810 aaKnown RBP eCLIP5.9□□□□□ -1.46
CD47-201ENST00000355354 POLR2IP36954 125 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 BFSP1Q12934 665 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 DLG1Q12959 904 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 OASLQ15646 514 aaKnown RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 TMEM266Q2M3C6 531 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 ARHGAP36Q6ZRI8 547 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.9□□□□□ -1.46
CD47-201ENST00000355354 GSTCDQ8NEC7 633 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 CERS2Q96G23 380 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 RPS6KC1Q96S38 1066 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 KCNK16Q96T55 309 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 LGMNQ99538 433 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms