RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PKDCCQ504Y2 493 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 KLHDC10Q6PID8 442 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 Q6ZNB5 142 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 ANKRD52Q8NB46 1076 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 CCDC150Q8NCX0 1101 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 TFAP2BQ92481 460 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 GTPBP4Q9BZE4 634 aaKnown RBP17.96■□□□□ 0.47
BRCC3-202ENST00000340647 UBXN6Q9BZV1 441 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 FAM124BQ9H5Z6 455 aaPredicted RBP17.96■□□□□ 0.47
BRCC3-202ENST00000340647 ZDHHC4Q9NPG8 344 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 TBC1D14Q9P2M4 693 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 NCDNQ9UBB6 729 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 HOOK1Q9UJC3 728 aaKnown RBP17.96■□□□□ 0.47
BRCC3-202ENST00000340647 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 THADAQ6YHU6 1953 aa17.96■□□□□ 0.47
BRCC3-202ENST00000340647 TNRC6BQ9UPQ9 1833 aaKnown RBP17.95■□□□□ 0.46
BRCC3-202ENST00000340647 SPTBN2O15020 2390 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 HOXC11O43248 304 aaPredicted RBP17.95■□□□□ 0.46
BRCC3-202ENST00000340647 ATG13O75143 517 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 ADH5P11766 374 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 CNR2P34972 360 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 EIF2DP41214 584 aaKnown RBP17.95■□□□□ 0.46
BRCC3-202ENST00000340647 SEC13P55735 322 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 DMC1Q14565 340 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 C2orf27AQ580R0 203 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 LAIR1Q6GTX8 287 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 TMEM92Q6UXU6 159 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 PRR23BQ6ZRT6 265 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 TRIM59Q8IWR1 403 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 CAMKK1Q8N5S9 505 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 FAM160A2Q8N612 972 aaPredicted RBP17.95■□□□□ 0.46
BRCC3-202ENST00000340647 NAT16Q8N8M0 369 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 OTUB2Q96DC9 234 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 METTL14Q9HCE5 456 aaKnown RBP17.95■□□□□ 0.46
BRCC3-202ENST00000340647 SPHK2Q9NRA0 654 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 CEP192Q8TEP8 1941 aa17.95■□□□□ 0.46
BRCC3-202ENST00000340647 ADAM23O75077 832 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 KAT7O95251 611 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 ATP5C1P36542 298 aaKnown RBP17.94■□□□□ 0.46
BRCC3-202ENST00000340647 MARSP56192 900 aaKnown RBP17.94■□□□□ 0.46
BRCC3-202ENST00000340647 PDE4CQ08493 712 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 SPEM2Q0P670 501 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 PM20D1Q6GTS8 502 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 KBTBD6Q86V97 674 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 ARHGEF19Q8IW93 802 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 TTC39CQ8N584 583 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 IL17RCQ8NAC3 791 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 GAB3Q8WWW8 586 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 PNKPQ96T60 521 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 EBF1Q9UH73 591 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 TSPAN16Q9UKR8 245 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 SLC8A2Q9UPR5 921 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 SH3BP1Q9Y3L3 701 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 EPG5Q9HCE0 2579 aa17.94■□□□□ 0.46
BRCC3-202ENST00000340647 CACNA1BQ00975 2339 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 O00370 1275 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 TULP3O75386 442 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 STC2O76061 302 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 ADH1CP00326 375 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 KDSRQ06136 332 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 GOLGA7BQ2TAP0 167 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 CCDC33Q8N5R6 958 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 UBA3Q8TBC4 463 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 KREMEN1Q96MU8 473 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 CLIC5Q9NZA1 410 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 NAGPAQ9UK23 515 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 MMP17Q9ULZ9 603 aa17.93■□□□□ 0.46
BRCC3-202ENST00000340647 TPRP12270 2363 aaKnown RBP17.93■□□□□ 0.46
BRCC3-202ENST00000340647 SGK1O00141 431 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 DCLK1O15075 740 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 RETP07949 1114 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 PPP1R2P41236 205 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 ZNF132P52740 706 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 GAD2Q05329 585 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 STIM1Q13586 685 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 CAMK4Q16566 473 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 RASSF3Q86WH2 238 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 MIB1Q86YT6 1006 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 IRF2BP1Q8IU81 584 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 ALLCQ8N6M5 410 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 SRRTQ9BXP5 876 aaKnown RBP17.92■□□□□ 0.46
BRCC3-202ENST00000340647 ULBP1Q9BZM6 244 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 ARHGEF4Q9NR80 690 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 KIAA1468Q9P260 1216 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 DNMT3LQ9UJW3 386 aa17.92■□□□□ 0.46
BRCC3-202ENST00000340647 KMT2BQ9UMN6 2715 aaPredicted RBP17.92■□□□□ 0.46
BRCC3-202ENST00000340647 XPO1O14980 1071 aaKnown RBP17.91■□□□□ 0.46
BRCC3-202ENST00000340647 AXIN1O15169 862 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 RPP40O75818 363 aaKnown RBP17.91■□□□□ 0.46
BRCC3-202ENST00000340647 CISD3P0C7P0 127 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 GRIA2P42262 883 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 PLA2G4AP47712 749 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 PSEN1P49768 467 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 TKTL1P51854 596 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 UBE2HP62256 183 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 MRPS21P82921 87 aaKnown RBP17.91■□□□□ 0.46
BRCC3-202ENST00000340647 KCNH2Q12809 1159 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 PAK1Q13153 545 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 CRY1Q16526 586 aa17.91■□□□□ 0.46
BRCC3-202ENST00000340647 CCDC40Q4G0X9 1142 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms