RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W YOR072WQ08486 104 aa2.3□□□□□ -2.04
SWI1YPL016W YJL127C-BQ3E828 52 aa2.29□□□□□ -2.04
SWI1YPL016W SDH6Q3E785 79 aa2.28□□□□□ -2.04
SWI1YPL016W YBL008W-AQ3E821 79 aa2.28□□□□□ -2.04
SWI1YPL016W YHR007C-AQ07074 71 aa2.28□□□□□ -2.04
SWI1YPL016W YDR115WQ04598 105 aa2.27□□□□□ -2.05
SWI1YPL016W YCR108CQ3E819 63 aa2.25□□□□□ -2.05
SWI1YPL016W YLL066W-BQ8TGJ7 56 aa2.25□□□□□ -2.05
SWI1YPL016W HUB1Q6Q546 73 aa2.24□□□□□ -2.05
SWI1YPL016W YBL039W-BP0C268 59 aa2.23□□□□□ -2.05
SWI1YPL016W PMP3P87284 55 aa2.22□□□□□ -2.05
SWI1YPL016W YER175W-AQ8TGU4 54 aa2.22□□□□□ -2.05
SWI1YPL016W SGF11Q03067 99 aa2.21□□□□□ -2.06
SWI1YPL016W YPR195CQ06594 109 aa2.2□□□□□ -2.06
SWI1YPL016W TMC1Q08422 150 aaPredicted RBP2.2□□□□□ -2.06
SWI1YPL016W RPC10P40422 70 aa2.19□□□□□ -2.06
SWI1YPL016W SNA2P56508 79 aa2.19□□□□□ -2.06
SWI1YPL016W YBR201C-AQ2V2Q3 67 aa2.18□□□□□ -2.06
SWI1YPL016W YJL144WP47009 104 aa2.18□□□□□ -2.06
SWI1YPL016W YCR041WP37265 110 aa2.17□□□□□ -2.06
SWI1YPL016W RPL33AP05744 107 aaKnown RBP2.15□□□□□ -2.06
SWI1YPL016W RPL33BP41056 107 aaKnown RBP2.15□□□□□ -2.06
SWI1YPL016W YHR032W-AP0C5N6 59 aa2.15□□□□□ -2.07
SWI1YPL016W YEL014CP39999 101 aa2.15□□□□□ -2.07
SWI1YPL016W DDR2P89113 61 aa2.15□□□□□ -2.07
SWI1YPL016W HOR7Q05827 59 aa2.14□□□□□ -2.07
SWI1YPL016W TOR1P35169 2470 aa2.13□□□□□ -2.07
SWI1YPL016W COX8P04039 78 aa2.13□□□□□ -2.07
SWI1YPL016W YGR146C-AQ8TGT9 53 aa2.13□□□□□ -2.07
SWI1YPL016W YBR016WP38216 128 aa2.11□□□□□ -2.07
SWI1YPL016W RPL37BP51402 88 aaKnown RBP2.11□□□□□ -2.07
SWI1YPL016W YOR316C-AQ3E806 69 aa2.11□□□□□ -2.07
SWI1YPL016W YHR212W-AP0CX91 67 aa2.1□□□□□ -2.07
SWI1YPL016W YOR394C-AQ8TGJ0 55 aa2.09□□□□□ -2.08
SWI1YPL016W YJR085CP47131 105 aaKnown RBP2.07□□□□□ -2.08
SWI1YPL016W LCL1Q02786 101 aa2.06□□□□□ -2.08
SWI1YPL016W YGR240C-AQ3E786 66 aa2.04□□□□□ -2.08
SWI1YPL016W YFL067WP43537 175 aa2.03□□□□□ -2.08
SWI1YPL016W YGL260WP53056 76 aa2.03□□□□□ -2.08
SWI1YPL016W Q0297Q9ZZV8 51 aa2.03□□□□□ -2.08
SWI1YPL016W YBL044WP38194 122 aa2.02□□□□□ -2.09
SWI1YPL016W YHR073W-AP0C5N7 58 aa1.97□□□□□ -2.09
SWI1YPL016W YOL097W-AQ3E7Y9 61 aa1.95□□□□□ -2.1
SWI1YPL016W YAL067W-AQ8TGK6 75 aa1.92□□□□□ -2.1
SWI1YPL016W OLI1P61829 76 aa1.89□□□□□ -2.11
SWI1YPL016W YGL041C-BQ3E750 60 aa1.89□□□□□ -2.11
SWI1YPL016W COX7P10174 60 aa1.88□□□□□ -2.11
SWI1YPL016W RPL37AP49166 88 aaKnown RBP1.87□□□□□ -2.11
SWI1YPL016W YDR034C-AP0C289 58 aa1.81□□□□□ -2.12
SWI1YPL016W HHY1P39982 102 aa1.78□□□□□ -2.12
SWI1YPL016W YJL009WP47078 108 aa1.72□□□□□ -2.13
SWI1YPL016W CUP1-1P0CX80 61 aa1.71□□□□□ -2.14
SWI1YPL016W CUP1-2P0CX81 61 aa1.71□□□□□ -2.14
SWI1YPL016W YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
SWI1YPL016W YBR072C-AQ3E794 53 aa1.66□□□□□ -2.14
SWI1YPL016W YHR086W-AQ3E746 53 aa1.57□□□□□ -2.16
SWI1YPL016W YOR072W-BQ3E832 53 aa1.56□□□□□ -2.16
SWI1YPL016W YLR157W-EP0CF00 54 aa1.29□□□□□ -2.2
SWI1YPL016W YML054C-AQ3E809 52 aa1.25□□□□□ -2.21
SWI1YPL016W Q0017Q9ZZX8 53 aa1.25□□□□□ -2.21
SWI1YPL016W YHR050W-AQ05451 56 aa1.11□□□□□ -2.23
SWI1YPL016W RPS29AP41057 56 aaKnown RBP1.04□□□□□ -2.24
SWI1YPL016W RPS29BP41058 56 aaKnown RBP0.86□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 59.2 ms