RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W YJL133C-AQ3E7A3 74 aa3.44□□□□□ -1.86
PWP1YLR196W YOL097W-AQ3E7Y9 61 aa3.44□□□□□ -1.86
PWP1YLR196W YBR201C-AQ2V2Q3 67 aa3.43□□□□□ -1.86
PWP1YLR196W YGL041C-BQ3E750 60 aa3.41□□□□□ -1.86
PWP1YLR196W RPL29P05747 59 aaPredicted RBP3.41□□□□□ -1.86
PWP1YLR196W YAL067W-AQ8TGK6 75 aa3.41□□□□□ -1.86
PWP1YLR196W MEC1P38111 2368 aa3.4□□□□□ -1.87
PWP1YLR196W YHR212W-AP0CX91 67 aa3.39□□□□□ -1.87
PWP1YLR196W YFL067WP43537 175 aa3.39□□□□□ -1.87
PWP1YLR196W YLR255CO13574 117 aa3.39□□□□□ -1.87
PWP1YLR196W YCL042WP25572 119 aa3.39□□□□□ -1.87
PWP1YLR196W MVB12P42939 101 aa3.38□□□□□ -1.87
PWP1YLR196W RPL33AP05744 107 aaKnown RBP3.37□□□□□ -1.87
PWP1YLR196W YGR240C-AQ3E786 66 aa3.37□□□□□ -1.87
PWP1YLR196W YNL162W-AQ3E7A8 72 aa3.36□□□□□ -1.87
PWP1YLR196W YAR064WP39563 99 aa3.36□□□□□ -1.87
PWP1YLR196W YLR307C-AQ3E825 87 aa3.36□□□□□ -1.87
PWP1YLR196W UTP20P35194 2493 aaKnown RBP3.35□□□□□ -1.87
PWP1YLR196W YOR072WQ08486 104 aa3.35□□□□□ -1.87
PWP1YLR196W RPC10P40422 70 aa3.34□□□□□ -1.87
PWP1YLR196W RDS3Q06835 107 aaPredicted RBP3.33□□□□□ -1.88
PWP1YLR196W YBR230W-AQ3E762 66 aa3.33□□□□□ -1.88
PWP1YLR196W DDR2P89113 61 aa3.3□□□□□ -1.88
PWP1YLR196W YJL127C-BQ3E828 52 aa3.3□□□□□ -1.88
PWP1YLR196W YJL144WP47009 104 aa3.28□□□□□ -1.88
PWP1YLR196W YOR394C-AQ8TGJ0 55 aa3.27□□□□□ -1.89
PWP1YLR196W RPL43AP0CX25 92 aaKnown RBP3.27□□□□□ -1.89
PWP1YLR196W RPL43BP0CX26 92 aa3.27□□□□□ -1.89
PWP1YLR196W YLL066W-BQ8TGJ7 56 aa3.26□□□□□ -1.89
PWP1YLR196W COX7P10174 60 aa3.25□□□□□ -1.89
PWP1YLR196W YJR128WP47162 119 aa3.24□□□□□ -1.89
PWP1YLR196W GIS2P53849 153 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89 RIP-Chip
PWP1YLR196W TOR1P35169 2470 aa3.24□□□□□ -1.89
PWP1YLR196W YHR007C-AQ07074 71 aa3.23□□□□□ -1.89
PWP1YLR196W NUM1Q00402 2748 aa3.2□□□□□ -1.9
PWP1YLR196W LCL1Q02786 101 aa3.18□□□□□ -1.9
PWP1YLR196W YMR230W-AQ3E7B5 62 aa3.18□□□□□ -1.9
PWP1YLR196W YGR146C-AQ8TGT9 53 aa3.18□□□□□ -1.9
PWP1YLR196W RPL37BP51402 88 aaKnown RBP3.15□□□□□ -1.91
PWP1YLR196W YCR108CQ3E819 63 aa3.15□□□□□ -1.91
PWP1YLR196W OLI1P61829 76 aa3.13□□□□□ -1.91
PWP1YLR196W DYN1P36022 4092 aa3.13□□□□□ -1.91
PWP1YLR196W YJL009WP47078 108 aa3.11□□□□□ -1.91
PWP1YLR196W YBL044WP38194 122 aa3.08□□□□□ -1.92
PWP1YLR196W YDR034C-AP0C289 58 aa3.06□□□□□ -1.92
PWP1YLR196W YBR016WP38216 128 aa3.05□□□□□ -1.92
PWP1YLR196W CUP1-1P0CX80 61 aa3.02□□□□□ -1.93
PWP1YLR196W CUP1-2P0CX81 61 aa3.02□□□□□ -1.93
PWP1YLR196W YOR316C-AQ3E806 69 aa3.02□□□□□ -1.93
PWP1YLR196W YHR073W-AP0C5N7 58 aa3.01□□□□□ -1.93
PWP1YLR196W YBR072C-AQ3E794 53 aa2.92□□□□□ -1.94
PWP1YLR196W HHY1P39982 102 aa2.85□□□□□ -1.95
PWP1YLR196W RPL37AP49166 88 aaKnown RBP2.82□□□□□ -1.96
PWP1YLR196W YOR072W-BQ3E832 53 aa2.75□□□□□ -1.97
PWP1YLR196W YHR086W-AQ3E746 53 aa2.72□□□□□ -1.97
PWP1YLR196W YOL164W-AQ3E7A5 60 aa2.6□□□□□ -1.99
PWP1YLR196W MDN1Q12019 4910 aaKnown RBP2.49□□□□□ -2.01
PWP1YLR196W Q0017Q9ZZX8 53 aa2.46□□□□□ -2.02
PWP1YLR196W YML054C-AQ3E809 52 aa2.44□□□□□ -2.02
PWP1YLR196W YLR157W-EP0CF00 54 aa2.37□□□□□ -2.03
PWP1YLR196W YHR050W-AQ05451 56 aa2.1□□□□□ -2.07
PWP1YLR196W RPS29AP41057 56 aaKnown RBP2.09□□□□□ -2.07
PWP1YLR196W RPS29BP41058 56 aaKnown RBP2□□□□□ -2.09
Retrieved 63 of 5,963 RNA–protein pairs in 27.2 ms