RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	MIC10	Q96VH5	97 aa		0.78	□□□□□ -2.28
SMC4	YLR086W	YBR027C	P38220	110 aa		0.78	□□□□□ -2.29
SMC4	YLR086W	RPL38	P49167	78 aa	Known RBP	0.78	□□□□□ -2.29
SMC4	YLR086W	YLL066W-B	Q8TGJ7	56 aa		0.78	□□□□□ -2.29
SMC4	YLR086W	YEL014C	P39999	101 aa		0.77	□□□□□ -2.29
SMC4	YLR086W	CDC39	P25655	2108 aa	Known RBP	0.77	□□□□□ -2.29
SMC4	YLR086W	YDR119W-A	Q2V2P9	66 aa		0.77	□□□□□ -2.29
SMC4	YLR086W	YOR072W-B	Q3E832	53 aa		0.77	□□□□□ -2.29
SMC4	YLR086W	YFR009W-A	P0C5M9	85 aa		0.76	□□□□□ -2.29
SMC4	YLR086W	YNL277W-A	Q3E7Z0	62 aa		0.76	□□□□□ -2.29
SMC4	YLR086W	YGR146C-A	Q8TGT9	53 aa		0.76	□□□□□ -2.29
SMC4	YLR086W	POL2	P21951	2222 aa	Known RBP	0.76	□□□□□ -2.29
SMC4	YLR086W	BLM10	P43583	2143 aa		0.76	□□□□□ -2.29
SMC4	YLR086W	SOM1	Q05676	74 aa		0.75	□□□□□ -2.29
SMC4	YLR086W	YLR361C-A	Q3E795	98 aa		0.75	□□□□□ -2.29
SMC4	YLR086W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.75	□□□□□ -2.29
SMC4	YLR086W	YCR095W-A	Q3E787	52 aa		0.75	□□□□□ -2.29
SMC4	YLR086W	YMR001C-A	Q8TGS9	76 aa		0.75	□□□□□ -2.29
SMC4	YLR086W	HFA1	P32874	2273 aa		0.75	□□□□□ -2.29
SMC4	YLR086W	QCR10	P37299	77 aa		0.75	□□□□□ -2.29
SMC4	YLR086W	YBR072C-A	Q3E794	53 aa		0.75	□□□□□ -2.29
SMC4	YLR086W	SEC16	P48415	2195 aa	Known RBP	0.75	□□□□□ -2.29
SMC4	YLR086W	YGL014C-A	P0C5N1	53 aa		0.74	□□□□□ -2.29
SMC4	YLR086W	AUA1	P32450	94 aa		0.74	□□□□□ -2.29
SMC4	YLR086W	YER188C-A	P0C0V2	99 aa		0.73	□□□□□ -2.29
SMC4	YLR086W	YMR122C	Q03879	124 aa		0.73	□□□□□ -2.29
SMC4	YLR086W	HHY1	P39982	102 aa		0.72	□□□□□ -2.29
SMC4	YLR086W	YJL197C-A	P0C5P0	93 aa		0.72	□□□□□ -2.29
SMC4	YLR086W	RPS30A	P0CX33	63 aa	Known RBP	0.72	□□□□□ -2.29
SMC4	YLR086W	RPS30B	P0CX34	63 aa	Known RBP	0.72	□□□□□ -2.29
SMC4	YLR086W	RPL37B	P51402	88 aa	Known RBP	0.72	□□□□□ -2.29
SMC4	YLR086W	URA2	P07259	2214 aa	Known RBP	0.72	□□□□□ -2.29
SMC4	YLR086W	YBR016W	P38216	128 aa		0.72	□□□□□ -2.29
SMC4	YLR086W	HUA1	P40325	198 aa		0.72	□□□□□ -2.29
SMC4	YLR086W	RPS29B	P41058	56 aa	Known RBP	0.72	□□□□□ -2.29
SMC4	YLR086W	YOR394C-A	Q8TGJ0	55 aa		0.72	□□□□□ -2.29
SMC4	YLR086W	RRT15	Q3E811	62 aa		0.71	□□□□□ -2.3
SMC4	YLR086W	YDR010C	Q12426	110 aa		0.71	□□□□□ -2.3
SMC4	YLR086W	NOP10	Q6Q547	58 aa	Predicted RBP	0.7	□□□□□ -2.3
SMC4	YLR086W	YOL166W-A	Q8TGJ1	51 aa		0.7	□□□□□ -2.3
SMC4	YLR086W	YOR376W-A	Q3E805	51 aa		0.69	□□□□□ -2.3
SMC4	YLR086W	YPR117W	Q06116	2489 aa		0.69	□□□□□ -2.3
SMC4	YLR086W	RPS29A	P41057	56 aa	Known RBP	0.69	□□□□□ -2.3
SMC4	YLR086W	YOR034C-A	Q3E735	80 aa		0.68	□□□□□ -2.3
SMC4	YLR086W	YDR210W	Q03482	75 aa		0.68	□□□□□ -2.3
SMC4	YLR086W	YJR128W	P47162	119 aa		0.67	□□□□□ -2.3
SMC4	YLR086W	RPL37A	P49166	88 aa	Known RBP	0.67	□□□□□ -2.3
SMC4	YLR086W	PRP8	P33334	2413 aa	Known RBP	0.67	□□□□□ -2.3
SMC4	YLR086W	YHR050W-A	Q05451	56 aa		0.67	□□□□□ -2.3
SMC4	YLR086W	YDR246W-A	Q3E763	66 aa		0.67	□□□□□ -2.3
SMC4	YLR086W	YBL044W	P38194	122 aa		0.67	□□□□□ -2.3
SMC4	YLR086W	BPH1	P25356	2167 aa		0.66	□□□□□ -2.3
SMC4	YLR086W	TOR2	P32600	2474 aa	Known RBP	0.63	□□□□□ -2.31
SMC4	YLR086W	MEC1	P38111	2368 aa		0.62	□□□□□ -2.31
SMC4	YLR086W	TOR1	P35169	2470 aa		0.6	□□□□□ -2.31
SMC4	YLR086W	YLR157W-E	P0CF00	54 aa		0.59	□□□□□ -2.31
SMC4	YLR086W	FMP27	Q06179	2628 aa		0.58	□□□□□ -2.32
SMC4	YLR086W	GCN1	P33892	2672 aa	Known RBP	0.57	□□□□□ -2.32
SMC4	YLR086W	YCR108C	Q3E819	63 aa		0.57	□□□□□ -2.32
SMC4	YLR086W	YOL164W-A	Q3E7A5	60 aa		0.56	□□□□□ -2.32
SMC4	YLR086W	NUM1	Q00402	2748 aa		0.53	□□□□□ -2.33
SMC4	YLR086W	UTP20	P35194	2493 aa	Known RBP	0.52	□□□□□ -2.33
SMC4	YLR086W	TEL1	P38110	2787 aa		0.49	□□□□□ -2.33

Retrieved 63 of 5,963 RNA–protein pairs in 148.1 ms