RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W MIC10Q96VH5 97 aa0.78□□□□□ -2.28
SMC4YLR086W YBR027CP38220 110 aa0.78□□□□□ -2.29
SMC4YLR086W RPL38P49167 78 aaKnown RBP0.78□□□□□ -2.29
SMC4YLR086W YLL066W-BQ8TGJ7 56 aa0.78□□□□□ -2.29
SMC4YLR086W YEL014CP39999 101 aa0.77□□□□□ -2.29
SMC4YLR086W CDC39P25655 2108 aaKnown RBP0.77□□□□□ -2.29
SMC4YLR086W YDR119W-AQ2V2P9 66 aa0.77□□□□□ -2.29
SMC4YLR086W YOR072W-BQ3E832 53 aa0.77□□□□□ -2.29
SMC4YLR086W YFR009W-AP0C5M9 85 aa0.76□□□□□ -2.29
SMC4YLR086W YNL277W-AQ3E7Z0 62 aa0.76□□□□□ -2.29
SMC4YLR086W YGR146C-AQ8TGT9 53 aa0.76□□□□□ -2.29
SMC4YLR086W POL2P21951 2222 aaKnown RBP0.76□□□□□ -2.29
SMC4YLR086W BLM10P43583 2143 aa0.76□□□□□ -2.29
SMC4YLR086W SOM1Q05676 74 aa0.75□□□□□ -2.29
SMC4YLR086W YLR361C-AQ3E795 98 aa0.75□□□□□ -2.29
SMC4YLR086W YOL013W-AP0C272 63 aaPredicted RBP0.75□□□□□ -2.29
SMC4YLR086W YCR095W-AQ3E787 52 aa0.75□□□□□ -2.29
SMC4YLR086W YMR001C-AQ8TGS9 76 aa0.75□□□□□ -2.29
SMC4YLR086W HFA1P32874 2273 aa0.75□□□□□ -2.29
SMC4YLR086W QCR10P37299 77 aa0.75□□□□□ -2.29
SMC4YLR086W YBR072C-AQ3E794 53 aa0.75□□□□□ -2.29
SMC4YLR086W SEC16P48415 2195 aaKnown RBP0.75□□□□□ -2.29
SMC4YLR086W YGL014C-AP0C5N1 53 aa0.74□□□□□ -2.29
SMC4YLR086W AUA1P32450 94 aa0.74□□□□□ -2.29
SMC4YLR086W YER188C-AP0C0V2 99 aa0.73□□□□□ -2.29
SMC4YLR086W YMR122CQ03879 124 aa0.73□□□□□ -2.29
SMC4YLR086W HHY1P39982 102 aa0.72□□□□□ -2.29
SMC4YLR086W YJL197C-AP0C5P0 93 aa0.72□□□□□ -2.29
SMC4YLR086W RPS30AP0CX33 63 aaKnown RBP0.72□□□□□ -2.29
SMC4YLR086W RPS30BP0CX34 63 aaKnown RBP0.72□□□□□ -2.29
SMC4YLR086W RPL37BP51402 88 aaKnown RBP0.72□□□□□ -2.29
SMC4YLR086W URA2P07259 2214 aaKnown RBP0.72□□□□□ -2.29
SMC4YLR086W YBR016WP38216 128 aa0.72□□□□□ -2.29
SMC4YLR086W HUA1P40325 198 aa0.72□□□□□ -2.29
SMC4YLR086W RPS29BP41058 56 aaKnown RBP0.72□□□□□ -2.29
SMC4YLR086W YOR394C-AQ8TGJ0 55 aa0.72□□□□□ -2.29
SMC4YLR086W RRT15Q3E811 62 aa0.71□□□□□ -2.3
SMC4YLR086W YDR010CQ12426 110 aa0.71□□□□□ -2.3
SMC4YLR086W NOP10Q6Q547 58 aaPredicted RBP0.7□□□□□ -2.3
SMC4YLR086W YOL166W-AQ8TGJ1 51 aa0.7□□□□□ -2.3
SMC4YLR086W YOR376W-AQ3E805 51 aa0.69□□□□□ -2.3
SMC4YLR086W YPR117WQ06116 2489 aa0.69□□□□□ -2.3
SMC4YLR086W RPS29AP41057 56 aaKnown RBP0.69□□□□□ -2.3
SMC4YLR086W YOR034C-AQ3E735 80 aa0.68□□□□□ -2.3
SMC4YLR086W YDR210WQ03482 75 aa0.68□□□□□ -2.3
SMC4YLR086W YJR128WP47162 119 aa0.67□□□□□ -2.3
SMC4YLR086W RPL37AP49166 88 aaKnown RBP0.67□□□□□ -2.3
SMC4YLR086W PRP8P33334 2413 aaKnown RBP0.67□□□□□ -2.3
SMC4YLR086W YHR050W-AQ05451 56 aa0.67□□□□□ -2.3
SMC4YLR086W YDR246W-AQ3E763 66 aa0.67□□□□□ -2.3
SMC4YLR086W YBL044WP38194 122 aa0.67□□□□□ -2.3
SMC4YLR086W BPH1P25356 2167 aa0.66□□□□□ -2.3
SMC4YLR086W TOR2P32600 2474 aaKnown RBP0.63□□□□□ -2.31
SMC4YLR086W MEC1P38111 2368 aa0.62□□□□□ -2.31
SMC4YLR086W TOR1P35169 2470 aa0.6□□□□□ -2.31
SMC4YLR086W YLR157W-EP0CF00 54 aa0.59□□□□□ -2.31
SMC4YLR086W FMP27Q06179 2628 aa0.58□□□□□ -2.32
SMC4YLR086W GCN1P33892 2672 aaKnown RBP0.57□□□□□ -2.32
SMC4YLR086W YCR108CQ3E819 63 aa0.57□□□□□ -2.32
SMC4YLR086W YOL164W-AQ3E7A5 60 aa0.56□□□□□ -2.32
SMC4YLR086W NUM1Q00402 2748 aa0.53□□□□□ -2.33
SMC4YLR086W UTP20P35194 2493 aaKnown RBP0.52□□□□□ -2.33
SMC4YLR086W TEL1P38110 2787 aa0.49□□□□□ -2.33
Retrieved 63 of 5,963 RNA–protein pairs in 8 ms