RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W YNL162W-AQ3E7A8 72 aa2.77□□□□□ -1.97
SSH4YKL124W DSE2P38844 325 aa2.75□□□□□ -1.97
SSH4YKL124W NOP10Q6Q547 58 aaPredicted RBP2.75□□□□□ -1.97
SSH4YKL124W YGL014C-AP0C5N1 53 aa2.74□□□□□ -1.97
SSH4YKL124W YNL042W-BQ3E7Z2 85 aa2.74□□□□□ -1.97
SSH4YKL124W BSC4P53841 131 aa2.73□□□□□ -1.97
SSH4YKL124W EDC1P53080 175 aaPredicted RBP2.72□□□□□ -1.97
SSH4YKL124W DDR2P89113 61 aa2.72□□□□□ -1.97
SSH4YKL124W YBR230W-AQ3E762 66 aa2.71□□□□□ -1.98
SSH4YKL124W YDR210WQ03482 75 aa2.71□□□□□ -1.98
SSH4YKL124W YJL127C-BQ3E828 52 aa2.71□□□□□ -1.98
SSH4YKL124W YJL144WP47009 104 aa2.7□□□□□ -1.98
SSH4YKL124W YOR034C-AQ3E735 80 aa2.68□□□□□ -1.98
SSH4YKL124W RPS30AP0CX33 63 aaKnown RBP2.66□□□□□ -1.98
SSH4YKL124W RPS30BP0CX34 63 aaKnown RBP2.66□□□□□ -1.98
SSH4YKL124W YOR072WQ08486 104 aa2.65□□□□□ -1.98
SSH4YKL124W YHR007C-AQ07074 71 aa2.64□□□□□ -1.99
SSH4YKL124W YDR182W-AQ3E796 67 aa2.64□□□□□ -1.99
SSH4YKL124W YOL166W-AQ8TGJ1 51 aa2.62□□□□□ -1.99
SSH4YKL124W YLR255CO13574 117 aa2.61□□□□□ -1.99
SSH4YKL124W YMR230W-AQ3E7B5 62 aa2.61□□□□□ -1.99
SSH4YKL124W ATP17Q06405 101 aa2.57□□□□□ -2
SSH4YKL124W RPL37BP51402 88 aaKnown RBP2.55□□□□□ -2
SSH4YKL124W YLR157W-DP0CE99 70 aa2.54□□□□□ -2
SSH4YKL124W YNL122CP53921 115 aaPredicted RBP2.54□□□□□ -2
SSH4YKL124W YBR201C-AQ2V2Q3 67 aa2.54□□□□□ -2
SSH4YKL124W YOL097W-AQ3E7Y9 61 aa2.54□□□□□ -2
SSH4YKL124W YJR107C-AP0CT86 78 aa2.54□□□□□ -2
SSH4YKL124W COX7P10174 60 aa2.54□□□□□ -2
SSH4YKL124W HUB1Q6Q546 73 aa2.53□□□□□ -2
SSH4YKL124W ATP18P81450 59 aa2.52□□□□□ -2.01
SSH4YKL124W YFR009W-AP0C5M9 85 aa2.51□□□□□ -2.01
SSH4YKL124W YHR213W-BQ8TGK1 99 aa2.51□□□□□ -2.01
SSH4YKL124W YJL133C-AQ3E7A3 74 aa2.48□□□□□ -2.01
SSH4YKL124W SDH6Q3E785 79 aa2.46□□□□□ -2.02
SSH4YKL124W YMR001C-AQ8TGS9 76 aa2.45□□□□□ -2.02
SSH4YKL124W YIL102CP40488 101 aa2.45□□□□□ -2.02
SSH4YKL124W YHR073W-AP0C5N7 58 aa2.43□□□□□ -2.02
SSH4YKL124W RPL38P49167 78 aaKnown RBP2.43□□□□□ -2.02
SSH4YKL124W YDL012CQ12489 107 aa2.41□□□□□ -2.02
SSH4YKL124W Q0017Q9ZZX8 53 aa2.4□□□□□ -2.02
SSH4YKL124W YJL009WP47078 108 aa2.39□□□□□ -2.03
SSH4YKL124W YJR128WP47162 119 aa2.38□□□□□ -2.03
SSH4YKL124W YAR064WP39563 99 aa2.37□□□□□ -2.03
SSH4YKL124W YHR086W-AQ3E746 53 aa2.34□□□□□ -2.03
SSH4YKL124W YOR316C-AQ3E806 69 aa2.34□□□□□ -2.04
SSH4YKL124W YOL013W-AP0C272 63 aaPredicted RBP2.32□□□□□ -2.04
SSH4YKL124W YOR394C-AQ8TGJ0 55 aa2.27□□□□□ -2.05
SSH4YKL124W YBR016WP38216 128 aa2.21□□□□□ -2.06
SSH4YKL124W YGR146C-AQ8TGT9 53 aa2.21□□□□□ -2.06
SSH4YKL124W HHY1P39982 102 aa2.2□□□□□ -2.06
SSH4YKL124W OLI1P61829 76 aa2.17□□□□□ -2.06
SSH4YKL124W YML054C-AQ3E809 52 aa2.17□□□□□ -2.06
SSH4YKL124W YBR072C-AQ3E794 53 aa2.15□□□□□ -2.07
SSH4YKL124W YCR108CQ3E819 63 aa2.13□□□□□ -2.07
SSH4YKL124W YBL044WP38194 122 aa2.11□□□□□ -2.07
SSH4YKL124W RPS29BP41058 56 aaKnown RBP2.11□□□□□ -2.07
SSH4YKL124W RPS29AP41057 56 aaKnown RBP2.09□□□□□ -2.07
SSH4YKL124W RPL37AP49166 88 aaKnown RBP2□□□□□ -2.09
SSH4YKL124W YOL164W-AQ3E7A5 60 aa1.96□□□□□ -2.1
SSH4YKL124W YLR157W-EP0CF00 54 aa1.9□□□□□ -2.11
SSH4YKL124W YOR072W-BQ3E832 53 aa1.77□□□□□ -2.13
SSH4YKL124W YHR050W-AQ05451 56 aa1.49□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 69.6 ms