RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C CUP1-2P0CX81 61 aa3.23□□□□□ -1.89
PAN1YIR006C YHR125WP38831 101 aa3.22□□□□□ -1.89
PAN1YIR006C YER188C-AP0C0V2 99 aa3.21□□□□□ -1.9
PAN1YIR006C YEL045CP32616 141 aa3.21□□□□□ -1.9
PAN1YIR006C MRX7P53869 86 aa3.21□□□□□ -1.9
PAN1YIR006C AUA1P32450 94 aa3.2□□□□□ -1.9
PAN1YIR006C TRA1P38811 3744 aa3.2□□□□□ -1.9
PAN1YIR006C YBL044WP38194 122 aa3.19□□□□□ -1.9
PAN1YIR006C YNL122CP53921 115 aaPredicted RBP3.19□□□□□ -1.9
PAN1YIR006C YFL067WP43537 175 aa3.18□□□□□ -1.9
PAN1YIR006C YJR085CP47131 105 aaKnown RBP3.18□□□□□ -1.9
PAN1YIR006C ATP17Q06405 101 aa3.17□□□□□ -1.9
PAN1YIR006C YLL066W-BQ8TGJ7 56 aa3.17□□□□□ -1.9
PAN1YIR006C YOR376W-AQ3E805 51 aa3.16□□□□□ -1.9
PAN1YIR006C LCL2Q08045 131 aa3.15□□□□□ -1.9
PAN1YIR006C GIS2P53849 153 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
PAN1YIR006C YOL166W-AQ8TGJ1 51 aa3.15□□□□□ -1.91
PAN1YIR006C YJR128WP47162 119 aa3.14□□□□□ -1.91
PAN1YIR006C YGR146C-AQ8TGT9 53 aa3.13□□□□□ -1.91
PAN1YIR006C YGL034CP53186 121 aa3.13□□□□□ -1.91
PAN1YIR006C YBR056W-AI2HB52 66 aa3.11□□□□□ -1.91
PAN1YIR006C YOR316C-AQ3E806 69 aa3.1□□□□□ -1.91
PAN1YIR006C YML100W-AQ8TGT0 57 aa3.08□□□□□ -1.92
PAN1YIR006C NUM1Q00402 2748 aa3.07□□□□□ -1.92
PAN1YIR006C YHR073W-AP0C5N7 58 aa3.06□□□□□ -1.92
PAN1YIR006C YJL144WP47009 104 aa3.06□□□□□ -1.92
PAN1YIR006C QCR10P37299 77 aa3.05□□□□□ -1.92
PAN1YIR006C SOM1Q05676 74 aa3.05□□□□□ -1.92
PAN1YIR006C IRA2P19158 3079 aa3.04□□□□□ -1.92
PAN1YIR006C YGL014C-AP0C5N1 53 aa3.04□□□□□ -1.92
PAN1YIR006C YDL012CQ12489 107 aa3.04□□□□□ -1.92
PAN1YIR006C CMC4Q3E7A9 73 aa3.03□□□□□ -1.93
PAN1YIR006C YBL008W-AQ3E821 79 aa3.02□□□□□ -1.93
PAN1YIR006C YML054C-AQ3E809 52 aa3.02□□□□□ -1.93
PAN1YIR006C FYV12Q08559 129 aa3.01□□□□□ -1.93
PAN1YIR006C YJL009WP47078 108 aa3□□□□□ -1.93
PAN1YIR006C IRA1P18963 3092 aa3□□□□□ -1.93
PAN1YIR006C YOR394C-AQ8TGJ0 55 aa2.99□□□□□ -1.93
PAN1YIR006C YOR072W-BQ3E832 53 aa2.97□□□□□ -1.93
PAN1YIR006C YJL197C-AP0C5P0 93 aa2.97□□□□□ -1.93
PAN1YIR006C CSF1Q12150 2958 aa2.95□□□□□ -1.94
PAN1YIR006C YLR255CO13574 117 aa2.93□□□□□ -1.94
PAN1YIR006C Q0017Q9ZZX8 53 aa2.92□□□□□ -1.94
PAN1YIR006C RPL37BP51402 88 aaKnown RBP2.9□□□□□ -1.94
PAN1YIR006C HHY1P39982 102 aa2.9□□□□□ -1.94
PAN1YIR006C TEL1P38110 2787 aa2.89□□□□□ -1.95
PAN1YIR006C YBR016WP38216 128 aa2.88□□□□□ -1.95
PAN1YIR006C YCR108CQ3E819 63 aa2.87□□□□□ -1.95
PAN1YIR006C YBR072C-AQ3E794 53 aa2.8□□□□□ -1.96
PAN1YIR006C RPL37AP49166 88 aaKnown RBP2.68□□□□□ -1.98
PAN1YIR006C YDR210WQ03482 75 aa2.65□□□□□ -1.99
PAN1YIR006C DYN1P36022 4092 aa2.64□□□□□ -1.99
PAN1YIR006C YER078W-AQ3E7A2 54 aa2.62□□□□□ -1.99
PAN1YIR006C YAL067W-AQ8TGK6 75 aa2.6□□□□□ -1.99
PAN1YIR006C YHR050W-AQ05451 56 aa2.43□□□□□ -2.02
PAN1YIR006C YOL164W-AQ3E7A5 60 aa2.39□□□□□ -2.03
PAN1YIR006C YER175W-AQ8TGU4 54 aa2.37□□□□□ -2.03
PAN1YIR006C RPS29BP41058 56 aaKnown RBP2.35□□□□□ -2.03
PAN1YIR006C YHR032W-AP0C5N6 59 aa2.33□□□□□ -2.04
PAN1YIR006C YLR157W-EP0CF00 54 aa2.32□□□□□ -2.04
PAN1YIR006C RPS29AP41057 56 aaKnown RBP2.26□□□□□ -2.05
PAN1YIR006C MDN1Q12019 4910 aaKnown RBP2.14□□□□□ -2.07
PAN1YIR006C YHR086W-AQ3E746 53 aa1.83□□□□□ -2.12
Retrieved 63 of 5,963 RNA–protein pairs in 17.6 ms